6EMY
Structure of the Tn1549 transposon Integrase (aa 82-397, Y379F) in complex with transposon right end DNA
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00589 | e6emyA3 | A: alpha arrays | X: HTH | H: HTH | T: DNA breaking-rejoining enzymes | F: PF00589 | ECOD (1.6) |
A | PF13102 | e6emyA1 | A: alpha arrays | X: lambda integrase-N-like | H: lambda integrase-N (From Topology) | T: lambda integrase-N | F: PF13102 | ECOD (1.6) |
B | PF00589 | e6emyB3 | A: alpha arrays | X: HTH | H: HTH | T: DNA breaking-rejoining enzymes | F: PF00589 | ECOD (1.6) |
B | PF13102 | e6emyB1 | A: alpha arrays | X: lambda integrase-N-like | H: lambda integrase-N (From Topology) | T: lambda integrase-N | F: PF13102 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00589 | Phage integrase family (Phage_integrase) | Phage integrase family | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011010 | DNA breaking-rejoining enzyme, catalytic core | Homologous Superfamily | |
IPR004191 | Integrase, Tn916-type, N-terminal DNA binding | Domain | |
IPR010998 | Integrase/recombinase, N-terminal | Homologous Superfamily | |
IPR044068 | Core-binding (CB) domain | Domain | |
IPR002104 | Integrase, catalytic domain | Domain | |
IPR013762 | Integrase-like, catalytic domain superfamily | Homologous Superfamily | |
IPR016177 | DNA-binding domain superfamily | Homologous Superfamily |