Annotations: 6DWZ

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Ribonuclease H-like	8038724	3000143	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Hermes dimerisation domain	8038725	3002013	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Ribonuclease H-like	8038724	3000143	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Hermes dimerisation domain	8038725	3002013	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF10683	e6dwzA1	A: alpha duplicates or obligate multimers	X: Hermes dimerisation domain (From Topology)	H: Hermes dimerisation domain (From Topology)	T: Hermes dimerisation domain	F: PF10683	ECOD (1.6)
A	PF05699	e6dwzA2	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: PF05699	ECOD (1.6)
E	PF10683	e6dwzE1	A: alpha duplicates or obligate multimers	X: Hermes dimerisation domain (From Topology)	H: Hermes dimerisation domain (From Topology)	T: Hermes dimerisation domain	F: PF10683	ECOD (1.6)
E	PF05699	e6dwzE2	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: PF05699	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.10.1070	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Zinc finger, BED domain-containing	CATH (utative)
E	1.10.10.1070	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Zinc finger, BED domain-containing	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, E	PF10683	Hermes transposase DNA-binding domain (DBD_Tnp_Hermes)	Hermes transposase DNA-binding domain	This domain confers specific DNA-binding on Hermes transposase [1].	Domain
A, E	PF05699	hAT family C-terminal dimerisation region (Dimer_Tnp_hAT)	hAT family C-terminal dimerisation region	This dimerisation region is found at the C terminus of the transposases of elements belonging to the Activator superfamily (hAT element superfamily). The isolated dimerisation region forms extremely stable dimers in vitro [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, E	Hermes transposase	DNA binding binding organic cyclic compound binding nucleic acid binding protein binding protein dimerization activity cation binding ion binding metal ion binding small molecule binding	nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process metabolic process primary metabolic process macromolecule metabolic process nucleic acid metabolic process	membrane-bounded organelle intracellular organelle intracellular anatomical structure organelle nucleus intracellular membrane-bounded organelle cellular anatomical entity
B, F	DNA (5'-D(GPAPGPAPAPCPAPAPCPAPAPCPAPAP*G)-3')	-	-	-
C, G	DNA (26-MER)	-	-	-
D, H	DNA (5'-D(GPCPGPTPGPAP*C)-3')	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, E	IPR018473	Hermes trasposase, DNA-binding domain	Domain
A, E	IPR012337	Ribonuclease H-like superfamily	Homologous Superfamily
A, E	IPR003656	Zinc finger, BED-type	Domain
A, E	IPR008906	HAT, C-terminal dimerisation domain	Domain

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.