Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
GSCOP2B SuperfamilyAlbA-like8091019 3000507 SCOP2B (2022-06-29)
ESCOP2 FamilyRpp14/Pop5-like8065988 4001975 SCOP2 (2022-06-29)
ESCOP2 SuperfamilyRnp2-like8065989 3000630 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
GPF12328e6agbG1 A: a+b two layersX: IF3-likeH: AlbA-like (From Topology)T: AlbA-likeF: PF12328ECOD (1.6)
IPF01876e6agbI1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: PF01876ECOD (1.6)
KPF04032e6agbK1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF04032ECOD (1.6)
EPF01900e6agbE1 A: a+b two layersX: Alpha-beta plaitsH: Rpp14/Pop5-like (From Topology)T: Rpp14/Pop5-likeF: PF01900ECOD (1.6)
FPF01918e6agbF1 A: a+b two layersX: IF3-likeH: AlbA-like (From Topology)T: AlbA-likeF: PF01918ECOD (1.6)
HPF20976e6agbH1 A: a+b two layersX: Alpha-beta plaitsH: Rpp14/Pop5-like (From Topology)T: Rpp14/Pop5-likeF: PF20976ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
G3.30.110.20 Alpha Beta 2-Layer Sandwich Translation Initiation Factor IF3 Alba-like domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF08170POPLD (NUC188) domain (POPLD)POPLD (NUC188) domainThis domain is found in POP1-like nucleolar proteins [1].Domain
PF06978Ribonucleases P/MRP protein subunit POP1, N-terminal (POP1_N)Ribonucleases P/MRP protein subunit POP1, N-terminalThis entry represents a conserved region approximately 150 residues long located towards the N-terminus of the POP1 subunit that is common to both the RNase MRP and RNase P ribonucleoproteins (EC:3.1.26.5) [1]. These RNA-containing enzymes generate m ...This entry represents a conserved region approximately 150 residues long located towards the N-terminus of the POP1 subunit that is common to both the RNase MRP and RNase P ribonucleoproteins (EC:3.1.26.5) [1]. These RNA-containing enzymes generate mature tRNA molecules by cleaving their 5' ends. This is a short N-terminal domain consisting of a small helical core and a long alpha-helix [2], which is enriched with positively charged residues involved in pre-tRNA substrate recognition [2].
Domain
PF12328Rpp20 subunit of nuclear RNase MRP and P (Rpp20)Rpp20 subunit of nuclear RNase MRP and P- Family
I, J
PF01876RNase P subunit p30 (RNase_P_p30)RNase P subunit p30This protein is part of the RNase P complex that is involved in tRNA maturation [1].Domain
PF04032RNAse P Rpr2/Rpp21/SNM1 subunit domain (Rpr2)RNAse P Rpr2/Rpp21/SNM1 subunit domain- Family
PF08228RNase P subunit Pop3 (RNase_P_pop3)RNase P subunit Pop3- Family
PF01868Ribonuclease P/MRP, subunit p29 (RNase_P-MRP_p29)Ribonuclease P/MRP, subunit p29- Family
PF01900Rpp14/Pop5 family (RNase_P_Rpp14)Rpp14/Pop5 family- Family
PF01918Alba (Alba)Alba- Family
PF20976Ribonucleases P/MRP protein subunit Pop8 (Pop8)Ribonucleases P/MRP protein subunit Pop8- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Ribonucleases P/MRP protein subunit POP1
Ribonucleases P/MRP protein subunit POP7
I, J
Ribonuclease P/MRP protein subunit RPP1
Ribonuclease P RNA---
Ribonuclease P protein subunit RPR2
Ribonucleases P/MRP protein subunit POP3-
RNases MRP/P 32.9 kDa subunit
Ribonuclease P/MRP protein subunit POP5
Ribonucleases P/MRP protein subunit POP6
Ribonucleases P/MRP protein subunit POP8