5YSJ

SdeA mART-C domain WT apo

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	UNK_F_TYPE	e5ysjB1	A: a+b complex topology	X: ADP-ribosylation (From Topology)	H: ADP-ribosylation (From Topology)	T: ADP-ribosylation	F: UNK_F_TYPE	ECOD (1.6)
D	UNK_F_TYPE	e5ysjD1	A: a+b complex topology	X: ADP-ribosylation (From Topology)	H: ADP-ribosylation (From Topology)	T: ADP-ribosylation	F: UNK_F_TYPE	ECOD (1.6)
A	UNK_F_TYPE	e5ysjA1	A: a+b complex topology	X: ADP-ribosylation (From Topology)	H: ADP-ribosylation (From Topology)	T: ADP-ribosylation	F: UNK_F_TYPE	ECOD (1.6)
C	UNK_F_TYPE	e5ysjC1	A: a+b complex topology	X: ADP-ribosylation (From Topology)	H: ADP-ribosylation (From Topology)	T: ADP-ribosylation	F: UNK_F_TYPE	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF19048	SidE mono-ADP-ribosyltransferase domain (SidE_mART)	SidE mono-ADP-ribosyltransferase domain	This domain found in the SidE bacterial effector protein mediates the mono-ADP-ribosylation of ubiquitin, which is then ligated to host proteins by the Pfam:PF12252 domain [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Ubiquitinating/deubiquitinating enzyme SdeA	K63-linked deubiquitinase activity ubiquitin-like protein peptidase activity peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity deubiquitinase activity deNEDDylase activity pentosyltransferase activity NAD+-protein-arginine ADP-ribosyltransferase activity glycosyltransferase activity NAD+-protein ADP-ribosyltransferase activity transferase activity binding K63-linked deubiquitinase activity ubiquitin-like protein peptidase activity peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity deubiquitinase activity deNEDDylase activity pentosyltransferase activity NAD+-protein-arginine ADP-ribosyltransferase activity glycosyltransferase activity NAD+-protein ADP-ribosyltransferase activity transferase activity binding nucleoside phosphate binding organic cyclic compound binding nucleotide binding heterocyclic compound binding small molecule binding cysteine-type peptidase activity nucleotidyltransferase activity transferase activity, transferring phosphorus-containing groups	protein deubiquitination organonitrogen compound metabolic process primary metabolic process organic substance metabolic process protein modification by small protein removal macromolecule modification metabolic process protein metabolic process macromolecule metabolic process post-translational protein modification protein modification process protein modification by small protein conjugation or removal protein deneddylation protein ubiquitination protein deubiquitination organonitrogen compound metabolic process primary metabolic process organic substance metabolic process protein modification by small protein removal macromolecule modification metabolic process protein metabolic process macromolecule metabolic process post-translational protein modification protein modification process protein modification by small protein conjugation or removal protein deneddylation protein ubiquitination protein modification by small protein conjugation proteolysis	host cellular component host cell cellular anatomical entity extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR043935	SidE, mono-ADP-ribosyltransferase domain	Domain
A, B, C, D	IPR021014	SidE, PDE domain	Domain
A, B, C, D	IPR043934	SidE, DUB domain	Domain

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.