Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BA [auth 5]SCOP2B SuperfamilyChlorophyll a-b binding protein8076976 3000343 SCOP2B (2022-06-29)
CA [auth 6]SCOP2B SuperfamilyChlorophyll a-b binding protein8076976 3000343 SCOP2B (2022-06-29)
R [auth N]SCOP2B SuperfamilyChlorophyll a-b binding protein8076976 3000343 SCOP2B (2022-06-29)
A [auth 1]SCOP2B SuperfamilyChlorophyll a-b binding protein8076976 3000343 SCOP2B (2022-06-29)
AB [auth y]SCOP2B SuperfamilyChlorophyll a-b binding protein8076976 3000343 SCOP2B (2022-06-29)
B [auth 2]SCOP2B SuperfamilyChlorophyll a-b binding protein8076976 3000343 SCOP2B (2022-06-29)
K [auth G]SCOP2B SuperfamilyChlorophyll a-b binding protein8076976 3000343 SCOP2B (2022-06-29)
LA [auth g]SCOP2B SuperfamilyChlorophyll a-b binding protein8076976 3000343 SCOP2B (2022-06-29)
SA [auth n]SCOP2B SuperfamilyChlorophyll a-b binding protein8076976 3000343 SCOP2B (2022-06-29)
Z [auth Y]SCOP2B SuperfamilyChlorophyll a-b binding protein8076976 3000343 SCOP2B (2022-06-29)
L [auth H]SCOP2B SuperfamilyPhotosystem II 10 kDa phosphoprotein PsbH8100730 3001547 SCOP2B (2022-06-29)
MA [auth h]SCOP2B SuperfamilyPhotosystem II 10 kDa phosphoprotein PsbH8100730 3001547 SCOP2B (2022-06-29)
M [auth I]SCOP2B SuperfamilyPhotosystem II reaction center protein I PsbI8097600 3001590 SCOP2B (2022-06-29)
NA [auth i]SCOP2B SuperfamilyPhotosystem II reaction center protein I PsbI8097600 3001590 SCOP2B (2022-06-29)
N [auth J]SCOP2B SuperfamilyPhotosystem II reaction center protein J PsbJ8098500 3001534 SCOP2B (2022-06-29)
OA [auth j]SCOP2B SuperfamilyPhotosystem II reaction center protein J PsbJ8098500 3001534 SCOP2B (2022-06-29)
O [auth K]SCOP2B SuperfamilyPhotosystem II reaction center protein K PsbK8097598 3001585 SCOP2B (2022-06-29)
PA [auth k]SCOP2B SuperfamilyPhotosystem II reaction center protein K PsbK8097598 3001585 SCOP2B (2022-06-29)
P [auth L]SCOP2B SuperfamilyPhotosystem II reaction center protein L PsbL8098790 3001523 SCOP2B (2022-06-29)
QA [auth l]SCOP2B SuperfamilyPhotosystem II reaction center protein L PsbL8098790 3001523 SCOP2B (2022-06-29)
Q [auth M]SCOP2B SuperfamilyPhotosystem II reaction center protein M PsbM8098916 3001573 SCOP2B (2022-06-29)
RA [auth m]SCOP2B SuperfamilyPhotosystem II reaction center protein M PsbM8098916 3001573 SCOP2B (2022-06-29)
TA [auth o]SCOP2B SuperfamilyOMPA barrel-like8098512 3000208 SCOP2B (2022-06-29)
S [auth O]SCOP2B SuperfamilyOMPA barrel-like8098512 3000208 SCOP2B (2022-06-29)
UA [auth r]SCOP2B SuperfamilyChlorophyll a-b binding protein8096646 3000343 SCOP2B (2022-06-29)
T [auth R]SCOP2B SuperfamilyChlorophyll a-b binding protein8096646 3000343 SCOP2B (2022-06-29)
U [auth S]SCOP2B SuperfamilyChlorophyll a-b binding protein8095217 3000343 SCOP2B (2022-06-29)
VA [auth s]SCOP2B SuperfamilyChlorophyll a-b binding protein8095217 3000343 SCOP2B (2022-06-29)
C [auth 3]SCOP2B SuperfamilyChlorophyll a-b binding protein8076984 3000343 SCOP2B (2022-06-29)
DA [auth 7]SCOP2B SuperfamilyChlorophyll a-b binding protein8076984 3000343 SCOP2B (2022-06-29)
AA [auth Z]SCOP2B SuperfamilyPsbZ-like8099370 3001624 SCOP2B (2022-06-29)
BB [auth z]SCOP2B SuperfamilyPsbZ-like8099370 3001624 SCOP2B (2022-06-29)
EA [auth 8]SCOP2B SuperfamilyChlorophyll a-b binding protein8096648 3000343 SCOP2B (2022-06-29)
D [auth 4]SCOP2B SuperfamilyChlorophyll a-b binding protein8096648 3000343 SCOP2B (2022-06-29)
FA [auth a]SCOP2B SuperfamilyBacterial photosystem II reaction centre L and M subunits8098298 3000736 SCOP2B (2022-06-29)
E [auth A]SCOP2B SuperfamilyBacterial photosystem II reaction centre L and M subunits8098298 3000736 SCOP2B (2022-06-29)
F [auth B]SCOP2B SuperfamilyPhotosystem II antenna protein-like8100732 3001674 SCOP2B (2022-06-29)
GA [auth b]SCOP2B SuperfamilyPhotosystem II antenna protein-like8100732 3001674 SCOP2B (2022-06-29)
G [auth C]SCOP2 FamilyPhotosystem II antenna protein-like8098289 4002735 SCOP2 (2022-06-29)
G [auth C]SCOP2 SuperfamilyPhotosystem II antenna protein-like8098290 3001674 SCOP2 (2022-06-29)
HA [auth c]SCOP2B SuperfamilyPhotosystem II antenna protein-like8098290 3001674 SCOP2B (2022-06-29)
IA [auth d]SCOP2B SuperfamilyBacterial photosystem II reaction centre L and M subunits8098294 3000736 SCOP2B (2022-06-29)
H [auth D]SCOP2B SuperfamilyBacterial photosystem II reaction centre L and M subunits8098294 3000736 SCOP2B (2022-06-29)
I [auth E]SCOP2B SuperfamilyCytochrome b559 subunits8098498 3001602 SCOP2B (2022-06-29)
JA [auth e]SCOP2B SuperfamilyCytochrome b559 subunits8098498 3001602 SCOP2B (2022-06-29)
J [auth F]SCOP2B SuperfamilyCytochrome b559 subunits8098832 3001602 SCOP2B (2022-06-29)
KA [auth f]SCOP2B SuperfamilyCytochrome b559 subunits8098832 3001602 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BA [auth 5]PF00504e5xnm51 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
CA [auth 6]PF00504e5xnm61 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
R [auth N]PF00504e5xnmN1 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
A [auth 1]PF00504e5xnm11 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
AB [auth y]PF00504e5xnmy1 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
B [auth 2]PF00504e5xnm21 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
K [auth G]PF00504e5xnmG1 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
LA [auth g]PF00504e5xnmg1 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
SA [auth n]PF00504e5xnmn1 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
Z [auth Y]PF00504e5xnmY1 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
L [auth H]PF00737e5xnmH1 A: extended segmentsX: Photosystem II 10 kDa phosphoprotein PsbH (From Topology)H: Photosystem II 10 kDa phosphoprotein PsbH (From Topology)T: Photosystem II 10 kDa phosphoprotein PsbHF: PF00737ECOD (1.6)
MA [auth h]PF00737e5xnmh1 A: extended segmentsX: Photosystem II 10 kDa phosphoprotein PsbH (From Topology)H: Photosystem II 10 kDa phosphoprotein PsbH (From Topology)T: Photosystem II 10 kDa phosphoprotein PsbHF: PF00737ECOD (1.6)
M [auth I]PF02532e5xnmI1 A: extended segmentsX: Photosystem II reaction center protein I, PsbI (From Topology)H: Photosystem II reaction center protein I, PsbI (From Topology)T: Photosystem II reaction center protein I, PsbIF: PF02532ECOD (1.6)
NA [auth i]PF02532e5xnmi1 A: extended segmentsX: Photosystem II reaction center protein I, PsbI (From Topology)H: Photosystem II reaction center protein I, PsbI (From Topology)T: Photosystem II reaction center protein I, PsbIF: PF02532ECOD (1.6)
N [auth J]PF01788e5xnmJ1 A: extended segmentsX: Photosystem II reaction center protein J, PsbJ (From Topology)H: Photosystem II reaction center protein J, PsbJ (From Topology)T: Photosystem II reaction center protein J, PsbJF: PF01788ECOD (1.6)
OA [auth j]PF01788e5xnmj1 A: extended segmentsX: Photosystem II reaction center protein J, PsbJ (From Topology)H: Photosystem II reaction center protein J, PsbJ (From Topology)T: Photosystem II reaction center protein J, PsbJF: PF01788ECOD (1.6)
O [auth K]PF02533e5xnmK1 A: extended segmentsX: Photosystem II reaction center protein K, PsbK (From Topology)H: Photosystem II reaction center protein K, PsbK (From Topology)T: Photosystem II reaction center protein K, PsbKF: PF02533ECOD (1.6)
PA [auth k]PF02533e5xnmk1 A: extended segmentsX: Photosystem II reaction center protein K, PsbK (From Topology)H: Photosystem II reaction center protein K, PsbK (From Topology)T: Photosystem II reaction center protein K, PsbKF: PF02533ECOD (1.6)
P [auth L]PF02419e5xnmL1 A: extended segmentsX: Photosystem II reaction center protein L, PsbL (From Topology)H: Photosystem II reaction center protein L, PsbL (From Topology)T: Photosystem II reaction center protein L, PsbLF: PF02419ECOD (1.6)
QA [auth l]PF02419e5xnml1 A: extended segmentsX: Photosystem II reaction center protein L, PsbL (From Topology)H: Photosystem II reaction center protein L, PsbL (From Topology)T: Photosystem II reaction center protein L, PsbLF: PF02419ECOD (1.6)
Q [auth M]PF05151e5xnmM1 A: extended segmentsX: Photosystem II reaction center protein M, PsbM (From Topology)H: Photosystem II reaction center protein M, PsbM (From Topology)T: Photosystem II reaction center protein M, PsbMF: PF05151ECOD (1.6)
RA [auth m]PF05151e5xnmm1 A: extended segmentsX: Photosystem II reaction center protein M, PsbM (From Topology)H: Photosystem II reaction center protein M, PsbM (From Topology)T: Photosystem II reaction center protein M, PsbMF: PF05151ECOD (1.6)
TA [auth o]PF01716e5xnmo1 A: beta barrelsX: Outer membrane meander beta-barrelsH: OMPA-like (From Topology)T: OMPA-likeF: PF01716ECOD (1.6)
S [auth O]PF01716e5xnmO1 A: beta barrelsX: Outer membrane meander beta-barrelsH: OMPA-like (From Topology)T: OMPA-likeF: PF01716ECOD (1.6)
UA [auth r]PF00504e5xnmr1 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
T [auth R]PF00504e5xnmR1 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
U [auth S]PF00504e5xnmS1 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
VA [auth s]PF00504e5xnms1 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
WA [auth t]PF01405e5xnmt1 A: extended segmentsX: Photosystem II reaction center protein T, PsbT (From Topology)H: Photosystem II reaction center protein T, PsbT (From Topology)T: Photosystem II reaction center protein T, PsbTF: PF01405ECOD (1.6)
V [auth T]PF01405e5xnmT1 A: extended segmentsX: Photosystem II reaction center protein T, PsbT (From Topology)H: Photosystem II reaction center protein T, PsbT (From Topology)T: Photosystem II reaction center protein T, PsbTF: PF01405ECOD (1.6)
C [auth 3]PF00504e5xnm31 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
DA [auth 7]PF00504e5xnm71 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
YA [auth w]PF07123e5xnmw1 A: extended segmentsX: Photosystem II reaction center W protein, chloroplastic (From Topology)H: Photosystem II reaction center W protein, chloroplastic (From Topology)T: Photosystem II reaction center W protein, chloroplasticF: PF07123ECOD (1.6)
X [auth W]PF07123e5xnmW1 A: extended segmentsX: Photosystem II reaction center W protein, chloroplastic (From Topology)H: Photosystem II reaction center W protein, chloroplastic (From Topology)T: Photosystem II reaction center W protein, chloroplasticF: PF07123ECOD (1.6)
Y [auth X]PF06596e5xnmX1 A: extended segmentsX: Photosystem II PsbX protein (From Topology)H: Photosystem II PsbX protein (From Topology)T: Photosystem II PsbX proteinF: PF06596ECOD (1.6)
ZA [auth x]PF06596e5xnmx1 A: extended segmentsX: Photosystem II PsbX protein (From Topology)H: Photosystem II PsbX protein (From Topology)T: Photosystem II PsbX proteinF: PF06596ECOD (1.6)
AA [auth Z]PF01737e5xnmZ1 A: extended segmentsX: PsbZ-like (From Topology)H: PsbZ-like (From Topology)T: PsbZ-likeF: PF01737ECOD (1.6)
BB [auth z]PF01737e5xnmz1 A: extended segmentsX: PsbZ-like (From Topology)H: PsbZ-like (From Topology)T: PsbZ-likeF: PF01737ECOD (1.6)
EA [auth 8]PF00504e5xnm81 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
D [auth 4]PF00504e5xnm41 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
FA [auth a]PF00124e5xnma1 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: PF00124ECOD (1.6)
E [auth A]PF00124e5xnmA1 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: PF00124ECOD (1.6)
F [auth B]PF00421e5xnmB2 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PF00421ECOD (1.6)
F [auth B]PF00421e5xnmB1 A: a+b two layersX: Photosystem II antenna protein PsbB insertion domain (From Topology)H: Photosystem II antenna protein PsbB insertion domain (From Topology)T: Photosystem II antenna protein PsbB insertion domainF: PF00421ECOD (1.6)
GA [auth b]PF00421e5xnmb2 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PF00421ECOD (1.6)
GA [auth b]PF00421e5xnmb1 A: a+b two layersX: Photosystem II antenna protein PsbB insertion domain (From Topology)H: Photosystem II antenna protein PsbB insertion domain (From Topology)T: Photosystem II antenna protein PsbB insertion domainF: PF00421ECOD (1.6)
G [auth C]PF00421e5xnmC1 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PF00421ECOD (1.6)
HA [auth c]PF00421e5xnmc1 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PF00421ECOD (1.6)
IA [auth d]PF00124e5xnmd1 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: PF00124ECOD (1.6)
H [auth D]PF00124e5xnmD1 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: PF00124ECOD (1.6)
I [auth E]PF00283,PF00284e5xnmE1 A: extended segmentsX: Cytochrome b559 subunits (From Topology)H: Cytochrome b559 subunits (From Topology)T: Cytochrome b559 subunitsF: PF00283,PF00284ECOD (1.6)
JA [auth e]PF00283,PF00284e5xnme1 A: extended segmentsX: Cytochrome b559 subunits (From Topology)H: Cytochrome b559 subunits (From Topology)T: Cytochrome b559 subunitsF: PF00283,PF00284ECOD (1.6)
J [auth F]PF00283e5xnmF1 A: extended segmentsX: Cytochrome b559 subunits (From Topology)H: Cytochrome b559 subunits (From Topology)T: Cytochrome b559 subunitsF: PF00283ECOD (1.6)
KA [auth f]PF00283e5xnmf1 A: extended segmentsX: Cytochrome b559 subunits (From Topology)H: Cytochrome b559 subunits (From Topology)T: Cytochrome b559 subunitsF: PF00283ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
L [auth H]1.20.5.880 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Photosystem II reaction center protein HCATH (4.3.0)
MA [auth h]1.20.5.880 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Photosystem II reaction center protein HCATH (4.3.0)
U [auth S]1.10.3460.10 Mainly Alpha Orthogonal Bundle Chlorophyll a-b binding protein Chlorophyll a/b binding protein domainCATH (4.3.0)
VA [auth s]1.10.3460.10 Mainly Alpha Orthogonal Bundle Chlorophyll a-b binding protein Chlorophyll a/b binding protein domainCATH (4.3.0)
C [auth 3]1.10.3460.10 Mainly Alpha Orthogonal Bundle Chlorophyll a-b binding protein Chlorophyll a/b binding protein domainCATH (4.3.0)
DA [auth 7]1.10.3460.10 Mainly Alpha Orthogonal Bundle Chlorophyll a-b binding protein Chlorophyll a/b binding protein domainCATH (4.3.0)
AA [auth Z]1.10.287.740 Mainly Alpha Orthogonal Bundle Helix Hairpins Photosystem II PsbZ, reaction centreCATH (4.3.0)
BB [auth z]1.10.287.740 Mainly Alpha Orthogonal Bundle Helix Hairpins Photosystem II PsbZ, reaction centreCATH (4.3.0)
F [auth B]3.10.680.10 Alpha Beta Roll Photosystem II CP47 reaction center protein Photosystem II CP47 reaction center proteinCATH (4.3.0)
GA [auth b]3.10.680.10 Alpha Beta Roll Photosystem II CP47 reaction center protein Photosystem II CP47 reaction center proteinCATH (4.3.0)
G [auth C]1.10.10.670 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A photosystem ii from thermosynechococcus elongatusCATH (4.3.0)
HA [auth c]1.10.10.670 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A photosystem ii from thermosynechococcus elongatusCATH (4.3.0)
I [auth E]1.20.5.860 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Photosystem II cytochrome b559, alpha subunitCATH (4.3.0)
JA [auth e]1.20.5.860 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Photosystem II cytochrome b559, alpha subunitCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
L [auth H],
MA [auth h]
PF00737Photosystem II 10 kDa phosphoprotein (PsbH)Photosystem II 10 kDa phosphoprotein- Family
M [auth I],
NA [auth i]
PF02532Photosystem II reaction centre I protein (PSII 4.8 kDa protein) (PsbI)Photosystem II reaction centre I protein (PSII 4.8 kDa protein)- Family
N [auth J],
OA [auth j]
PF01788PsbJ (PsbJ)PsbJ- Family
O [auth K],
PA [auth k]
PF02533Photosystem II 4 kDa reaction centre component (PsbK)Photosystem II 4 kDa reaction centre component- Family
P [auth L],
QA [auth l]
PF02419PsbL protein (PsbL)PsbL protein- Family
Q [auth M],
RA [auth m]
PF05151Photosystem II reaction centre M protein (PsbM) (PsbM)Photosystem II reaction centre M protein (PsbM)- Family
S [auth O],
TA [auth o]
PF01716Manganese-stabilising protein / photosystem II polypeptide (MSP)Manganese-stabilising protein / photosystem II polypeptide- Family
T [auth R],
UA [auth r]
PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
U [auth S],
VA [auth s]
PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
V [auth T],
WA [auth t]
PF01405Photosystem II reaction centre T protein (PsbT)Photosystem II reaction centre T protein- Family
C [auth 3],
DA [auth 7]
PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
X [auth W],
YA [auth w]
PF07123Photosystem II reaction centre W protein (PsbW) (PsbW)Photosystem II reaction centre W protein (PsbW)- Family
Y [auth X],
ZA [auth x]
PF06596Photosystem II reaction centre X protein (PsbX) (PsbX)Photosystem II reaction centre X protein (PsbX)- Family
AA [auth Z],
BB [auth z]
PF01737YCF9 (Ycf9)YCF9- Family
D [auth 4],
EA [auth 8]
PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
E [auth A],
FA [auth a]
PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family
F [auth B],
GA [auth b]
PF00421Photosystem II protein (PSII)Photosystem II protein- Family
G [auth C],
HA [auth c]
PF00421Photosystem II protein (PSII)Photosystem II protein- Family
H [auth D],
IA [auth d]
PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family
I [auth E],
JA [auth e]
PF00283Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits (Cytochrom_B559)Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits- Family
I [auth E],
JA [auth e]
PF00284Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit (Cytochrom_B559a)Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit- Family
J [auth F],
KA [auth f]
PF00283Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits (Cytochrom_B559)Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Chlorophyll a-b binding protein 8, chloroplastic
L [auth H],
MA [auth h]
Photosystem II reaction center protein H
M [auth I],
NA [auth i]
Photosystem II reaction center protein I, PsbI-
N [auth J],
OA [auth j]
Photosystem II reaction center protein J-
O [auth K],
PA [auth k]
Photosystem II reaction center protein K-
P [auth L],
QA [auth l]
Photosystem II reaction center protein L-
Q [auth M],
RA [auth m]
Photosystem II reaction center protein M-
S [auth O],
TA [auth o]
Oxygen-evolving enhancer protein 1, chloroplastic
T [auth R],
UA [auth r]
Light harvesting chlorophyll a/b-binding protein Lhcb4, CP29
U [auth S],
VA [auth s]
Light harvesting chlorophyll a/b-binding protein Lhcb5, CP26
V [auth T],
WA [auth t]
Photosystem II reaction center protein T-
C [auth 3],
DA [auth 7]
Chlorophyll a-b binding protein, chloroplastic
W [auth U],
XA [auth u]
Photosystem II luminal extrinsic protein Tn, PsbTn---
X [auth W],
YA [auth w]
Photosystem II reaction center protein W, PSBW-
Y [auth X],
ZA [auth x]
Photosystem II reaction center protein X-
AA [auth Z],
BB [auth z]
Photosystem II reaction center protein Z-
D [auth 4],
EA [auth 8]
Light harvesting chlorophyll a/b-binding protein Lhcb6, CP24
E [auth A],
FA [auth a]
Photosystem II protein D1
F [auth B],
GA [auth b]
Photosystem II CP47 reaction center protein
G [auth C],
HA [auth c]
Photosystem II CP43 reaction center protein
H [auth D],
IA [auth d]
Photosystem II D2 protein
I [auth E],
JA [auth e]
Cytochrome b559 subunit alpha
J [auth F],
KA [auth f]
Cytochrome b559 subunit beta, PsbF

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
IPR022796Chlorophyll A-B binding proteinFamily
L [auth H],
MA [auth h]
IPR036863Photosystem II reaction centre protein H superfamilyHomologous Superfamily
L [auth H],
MA [auth h]
IPR001056Photosystem II reaction centre protein HFamily
M [auth I],
NA [auth i]
IPR037271Photosystem II PsbI superfamilyHomologous Superfamily
M [auth I],
NA [auth i]
IPR003686Photosystem II PsbIFamily
N [auth J],
OA [auth j]
IPR002682Photosystem II PsbJFamily
N [auth J],
OA [auth j]
IPR037267Photosystem II PsbJ superfamilyHomologous Superfamily
O [auth K],
PA [auth k]
IPR037270Photosystem II PsbK superfamilyHomologous Superfamily
O [auth K],
PA [auth k]
IPR003687Photosystem II PsbKFamily
P [auth L],
QA [auth l]
IPR003372Photosystem II PsbLFamily
P [auth L],
QA [auth l]
IPR037266Photosystem II PsbL superfamilyHomologous Superfamily
Q [auth M],
RA [auth m]
IPR007826Photosystem II PsbMFamily
Q [auth M],
RA [auth m]
IPR037269Photosystem II PsbM superfamilyHomologous Superfamily
S [auth O],
TA [auth o]
IPR011250Outer membrane protein/outer membrane enzyme PagP, beta-barrelHomologous Superfamily
S [auth O],
TA [auth o]
IPR002628Photosystem II extrinsic protein OFamily
T [auth R],
UA [auth r]
IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
T [auth R],
UA [auth r]
IPR022796Chlorophyll A-B binding proteinFamily
U [auth S],
VA [auth s]
IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
U [auth S],
VA [auth s]
IPR022796Chlorophyll A-B binding proteinFamily
V [auth T],
WA [auth t]
IPR001743Photosystem II PsbTFamily
V [auth T],
WA [auth t]
IPR037268Photosystem II PsbT superfamilyHomologous Superfamily
C [auth 3],
DA [auth 7]
IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
C [auth 3],
DA [auth 7]
IPR022796Chlorophyll A-B binding proteinFamily
X [auth W],
YA [auth w]
IPR009806Photosystem II PsbW, class 2Family
Y [auth X],
ZA [auth x]
IPR009518Photosystem II PsbXFamily
Y [auth X],
ZA [auth x]
IPR023431Photosystem II PsbX, type 1 subfamilyFamily
AA [auth Z],
BB [auth z]
IPR036512Photosystem II PsbZ superfamilyHomologous Superfamily
AA [auth Z],
BB [auth z]
IPR002644Photosystem II PsbZ, reaction centreFamily
D [auth 4],
EA [auth 8]
IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
D [auth 4],
EA [auth 8]
IPR022796Chlorophyll A-B binding proteinFamily
E [auth A],
FA [auth a]
IPR005867Photosystem II protein D1Family
E [auth A],
FA [auth a]
IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
E [auth A],
FA [auth a]
IPR000484Photosynthetic reaction centre, L/MFamily
F [auth B],
GA [auth b]
IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
F [auth B],
GA [auth b]
IPR000932Photosystem antenna protein-likeFamily
F [auth B],
GA [auth b]
IPR017486Photosystem II CP47 reaction centre proteinFamily
G [auth C],
HA [auth c]
IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
G [auth C],
HA [auth c]
IPR000932Photosystem antenna protein-likeFamily
G [auth C],
HA [auth c]
IPR005869Photosystem II CP43 reaction centre proteinFamily
G [auth C],
HA [auth c]
IPR044900Photosystem II CP43 reaction centre protein superfamilyHomologous Superfamily
H [auth D],
IA [auth d]
IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
H [auth D],
IA [auth d]
IPR000484Photosynthetic reaction centre, L/MFamily
H [auth D],
IA [auth d]
IPR005868Photosystem II D2 proteinFamily
I [auth E],
JA [auth e]
IPR013081Photosystem II cytochrome b559, N-terminalDomain
I [auth E],
JA [auth e]
IPR006217Photosystem II cytochrome b559, alpha subunitFamily
I [auth E],
JA [auth e]
IPR013082Photosystem II cytochrome b559, alpha subunit, lumenal regionDomain
I [auth E],
JA [auth e]
IPR037025Photosystem II cytochrome b559, alpha subunit superfamilyHomologous Superfamily
I [auth E],
JA [auth e]
IPR006216Photosystem II cytochrome b559, conserved siteConserved Site
J [auth F],
KA [auth f]
IPR006241Photosystem II cytochrome b559, beta subunitFamily
J [auth F],
KA [auth f]
IPR013081Photosystem II cytochrome b559, N-terminalDomain
J [auth F],
KA [auth f]
IPR006216Photosystem II cytochrome b559, conserved siteConserved Site