5V3G
PRDM9-allele-C ZnF8-13
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth D] | SCOP2B Superfamily | beta-beta-alpha zinc fingers | 8064790 | 3001077 | SCOP2B (2022-06-29) |
F [auth A] | SCOP2B Superfamily | beta-beta-alpha zinc fingers | 8064790 | 3001077 | SCOP2B (2022-06-29) |
G | SCOP2 Family | Classic zinc finger C2H2 | 8064789 | 4003583 | SCOP2 (2022-06-29) |
G | SCOP2 Superfamily | beta-beta-alpha zinc fingers | 8064790 | 3001077 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth D] | PF00096 | e5v3gD1 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: PF00096 | ECOD (1.6) |
F [auth A] | PF00096 | e5v3gA3 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: PF00096 | ECOD (1.6) |
G | PF00096 | e5v3gG1 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: PF00096 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth D], F [auth A], G | PF00096 | Zinc finger, C2H2 type (zf-C2H2) | Zinc finger, C2H2 type | The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, an ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth E], D [auth B] | DNA (5'-D(*TP*GP*AP*CP*CP*CP*CP*AP*GP*TP*GP*AP*GP*CP*GP*TP*TP*GP*CP*CP*C)-3') | - | - | - |
B [auth F], E [auth C] | DNA (5'-D(*AP*GP*GP*GP*CP*AP*AP*CP*GP*CP*TP*CP*AP*CP*TP*GP*GP*GP*GP*TP*C)-3') | - | - | - |
C [auth D], F [auth A], G | PR domain zinc finger protein 9 | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth D], F [auth A], G | IPR013087 | Zinc finger C2H2-type | Domain |
C [auth D], F [auth A], G | IPR036236 | Zinc finger C2H2 superfamily | Homologous Superfamily |