Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF08798e5u0aA1 A: a+b two layersX: Alpha-beta plaitsH: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology)T: CRISPR transcript (pre-crRNA) processing endoribonuclease-relatedF: PF08798ECOD (1.6)
B [auth C]PF09481e5u0aC1 A: a+b complex topologyX: Cas8-likeH: Cascade subunit CasA/Cse1/Cas8 (From Topology)T: Cascade subunit CasA/Cse1/Cas8F: PF09481ECOD (1.6)
C [auth D]PF09344e5u0aD1 A: a+b two layersX: Alpha-beta plaitsH: Cas7-relatedT: CRISPR-associated protein Cas7/Csa2-relatedF: PF09344ECOD (1.6)
D [auth E]PF09344e5u0aE1 A: a+b two layersX: Alpha-beta plaitsH: Cas7-relatedT: CRISPR-associated protein Cas7/Csa2-relatedF: PF09344ECOD (1.6)
E [auth F]PF09344e5u0aF1 A: a+b two layersX: Alpha-beta plaitsH: Cas7-relatedT: CRISPR-associated protein Cas7/Csa2-relatedF: PF09344ECOD (1.6)
F [auth G]PF09344e5u0aG1 A: a+b two layersX: Alpha-beta plaitsH: Cas7-relatedT: CRISPR-associated protein Cas7/Csa2-relatedF: PF09344ECOD (1.6)
G [auth H]PF09344e5u0aH1 A: a+b two layersX: Alpha-beta plaitsH: Cas7-relatedT: CRISPR-associated protein Cas7/Csa2-relatedF: PF09344ECOD (1.6)
H [auth I]PF09344e5u0aI1 A: a+b two layersX: Alpha-beta plaitsH: Cas7-relatedT: CRISPR-associated protein Cas7/Csa2-relatedF: PF09344ECOD (1.6)
I [auth J]PF09485e5u0aJ1 A: alpha bundlesX: CRISPR-associated protein Cse2 (From Topology)H: CRISPR-associated protein Cse2 (From Topology)T: CRISPR-associated protein Cse2F: PF09485ECOD (1.6)
K [auth L]PF09485e5u0aL1 A: alpha bundlesX: CRISPR-associated protein Cse2 (From Topology)H: CRISPR-associated protein Cse2 (From Topology)T: CRISPR-associated protein Cse2F: PF09485ECOD (1.6)
M [auth N]PF09704e5u0aN1 A: a+b two layersX: Alpha-beta plaitsH: CRISPR system Cas5 homologs (From Topology)T: CRISPR system Cas5 homologsF: PF09704ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF08798CRISPR associated protein (CRISPR_assoc)CRISPR associated proteinThis domain forms an anti-parallel beta strand structure with flanking alpha helical regions.Domain
B [auth C]PF09481CRISPR-associated protein Cse1 (CRISPR_cse1) (CRISPR_Cse1)CRISPR-associated protein Cse1 (CRISPR_cse1)- Family
PF09344CT1975-like protein (Cas_CT1975)CT1975-like protein- Family
I [auth J],
K [auth L]
PF09485CRISPR-associated protein Cse2 (CRISPR_cse2) (CRISPR_Cse2)CRISPR-associated protein Cse2 (CRISPR_cse2)- Family
M [auth N]PF09704CRISPR-associated protein (Cas_Cas5) (Cas_Cas5d)CRISPR-associated protein (Cas_Cas5)- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
CRISPR-associated protein, Cse3 family- - -
B [auth C]CRISPR-associated protein, Cse1 family- - -
CRISPR-associated protein, Cse4 family- - -
I [auth J],
K [auth L]
Cse2 - -
J [auth K]crRNA---
L [auth M]Target Strand---
M [auth N]CRISPR-associated protein, Cas5e family -
N [auth O]Nontarget Strand---