5T81

Rhombohedral crystal form of the EpoB NRPS cyclization-docking bidomain from Sorangium cellulosum

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BEUF08210e5t81B3 A: alpha duplicates or obligate multimersX: Docking domains in modular polyketide synthasesH: Class 3 N-terminal docking domain (From Topology)T: Class 3 N-terminal docking domainF: EUF08210ECOD (1.6)
BCondensation_Ne5t81B2 A: a+b complex topologyX: CoA-dependent acyltransferases (From Topology)H: CoA-dependent acyltransferases (From Topology)T: CoA-dependent acyltransferasesF: Condensation_NECOD (1.6)
BCondensation_C_1e5t81B1 A: a+b complex topologyX: CoA-dependent acyltransferases (From Topology)H: CoA-dependent acyltransferases (From Topology)T: CoA-dependent acyltransferasesF: Condensation_C_1ECOD (1.6)
AEUF08210e5t81A3 A: alpha duplicates or obligate multimersX: Docking domains in modular polyketide synthasesH: Class 3 N-terminal docking domain (From Topology)T: Class 3 N-terminal docking domainF: EUF08210ECOD (1.6)
ACondensation_Ne5t81A2 A: a+b complex topologyX: CoA-dependent acyltransferases (From Topology)H: CoA-dependent acyltransferases (From Topology)T: CoA-dependent acyltransferasesF: Condensation_NECOD (1.6)
ACondensation_C_1e5t81A1 A: a+b complex topologyX: CoA-dependent acyltransferases (From Topology)H: CoA-dependent acyltransferases (From Topology)T: CoA-dependent acyltransferasesF: Condensation_C_1ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00668Condensation domain (Condensation)Condensation domain- Family
A, B
PF18563TubC N-terminal docking domain (TubC_N)TubC N-terminal docking domainThis is the N-terminal docking domain found in TubC proteins from the tubulysin polyketide synthase and nonribosomal polypeptide synthetase (PKS-NRPS) system, which binds to C-terminal docking domain of TubB [1].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
EpoB - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR044894TubC, N-terminal docking domain superfamilyHomologous Superfamily
A, B
IPR029479NitroreductaseDomain
A, B
IPR009081Phosphopantetheine binding ACP domainDomain
A, B
IPR010071Amino acid adenylation domainDomain
A, B
IPR020845AMP-binding, conserved siteConserved Site
A, B
IPR023213Chloramphenicol acetyltransferase-like domain superfamilyHomologous Superfamily
A, B
IPR045851AMP-binding enzyme, C-terminal domain superfamilyHomologous Superfamily
A, B
IPR020806Polyketide synthase, phosphopantetheine-binding domainDomain
A, B
IPR001242Condensation domainDomain
A, B
IPR036736ACP-like superfamilyHomologous Superfamily
A, B
IPR000415Nitroreductase-likeHomologous Superfamily
A, B
IPR041464TubC, N-terminal docking domainDomain
A, B
IPR000873AMP-dependent synthetase/ligase domainDomain