5T5H

Structure and assembly model for the Trypanosoma cruzi 60S ribosomal subunit


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
K [auth N]SCOP2 FamilyRibosomal protein L13e8048856 4006241 SCOP2 (2022-06-29)
K [auth N]SCOP2 SuperfamilyRibosomal protein L13e-like8053156 3002162 SCOP2 (2022-06-29)
N [auth Q]SCOP2 FamilyL15e8082486 4000945 SCOP2 (2022-06-29)
N [auth Q]SCOP2 SuperfamilyRibosomal proteins S24e L23 and L15e8082487 3000210 SCOP2 (2022-06-29)
O [auth R]SCOP2 FamilyRibosomal protein L228076709 4001212 SCOP2 (2022-06-29)
O [auth R]SCOP2 SuperfamilyRibosomal protein L228076710 3001078 SCOP2 (2022-06-29)
Q [auth T]SCOP2 FamilyRibosomal protein L19 (L19e)8077466 4001138 SCOP2 (2022-06-29)
Q [auth T]SCOP2 SuperfamilyRibosomal protein L19 (L19e)8077467 3000890 SCOP2 (2022-06-29)
S [auth V]SCOP2 Family60S Ribosomal protein L22e8049497 4006528 SCOP2 (2022-06-29)
S [auth V]SCOP2 Superfamily60S Ribosomal protein L22e8053064 3002158 SCOP2 (2022-06-29)
T [auth W]SCOP2 FamilyRibosomal protein L148072041 4001826 SCOP2 (2022-06-29)
T [auth W]SCOP2 Superfamily50S Ribosomal protein L14-like8072042 3000433 SCOP2 (2022-06-29)
U [auth X]SCOP2 FamilyL23p8061168 4000943 SCOP2 (2022-06-29)
U [auth X]SCOP2 SuperfamilyRibosomal proteins S24e L23 and L15e8077087 3000210 SCOP2 (2022-06-29)
W [auth Z]SCOP2 FamilyRibosomal proteins L24p and L21e8076751 4001752 SCOP2 (2022-06-29)
W [auth Z]SCOP2 SuperfamilyTranslation proteins SH3-like KOW motif containing domain8076752 3000334 SCOP2 (2022-06-29)
X [auth a]SCOP2 FamilyRibosomal protein L27e8049503 4006529 SCOP2 (2022-06-29)
X [auth a]SCOP2 SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053049 3000334 SCOP2 (2022-06-29)
Y [auth b]SCOP2 FamilyRibosomal proteins L15p and L18e8099485 4003555 SCOP2 (2022-06-29)
Y [auth b]SCOP2 SuperfamilyRibosomal proteins L15p and L18e8099486 3001045 SCOP2 (2022-06-29)
AA [auth d]SCOP2 FamilyRibosomal protein L29e8049526 4006531 SCOP2 (2022-06-29)
AA [auth d]SCOP2 SuperfamilyRibosomal protein L29e8053038 3002157 SCOP2 (2022-06-29)
CA [auth f]SCOP2 FamilyRibosomal protein L38100871 4002103 SCOP2 (2022-06-29)
CA [auth f]SCOP2 SuperfamilyTranslational proteins8100872 3000811 SCOP2 (2022-06-29)
FA [auth i]SCOP2 FamilyRibosomal protein L32e8102173 4003517 SCOP2 (2022-06-29)
FA [auth i]SCOP2 SuperfamilyRibosomal protein L32e8102174 3000982 SCOP2 (2022-06-29)
GA [auth j]SCOP2 FamilyRibosomal protein L34e-like8048734 4006193 SCOP2 (2022-06-29)
GA [auth j]SCOP2 SuperfamilyRibosomal protein L34e-like8053538 3002203 SCOP2 (2022-06-29)
IA [auth l]SCOP2 FamilyRibosomal protein L35ae8099487 4003173 SCOP2 (2022-06-29)
IA [auth l]SCOP2 SuperfamilyTranslational proteins8099488 3000811 SCOP2 (2022-06-29)
JA [auth m]SCOP2 FamilyRibosomal protein L36e8048631 4006168 SCOP2 (2022-06-29)
JA [auth m]SCOP2 SuperfamilyRibosomal protein L36e8053122 3002161 SCOP2 (2022-06-29)
LA [auth o]SCOP2 FamilyRibosomal protein L37ae8099467 4003704 SCOP2 (2022-06-29)
LA [auth o]SCOP2 SuperfamilyZn-binding ribosomal proteins8099468 3001320 SCOP2 (2022-06-29)
MA [auth p]SCOP2 FamilyRibosomal L38e protein-like8049534 4006532 SCOP2 (2022-06-29)
MA [auth p]SCOP2 SuperfamilyRibosomal L38e protein-like8053573 3002206 SCOP2 (2022-06-29)
NA [auth q]SCOP2 Familyribosomal protein l39e8099475 4001518 SCOP2 (2022-06-29)
NA [auth q]SCOP2 SuperfamilyRibosomal protein L39e8099476 3001756 SCOP2 (2022-06-29)
OA [auth r]SCOP2 Family60S ribosomal protein L4 C-terminal domain-like8049951 4006700 SCOP2 (2022-06-29)
OA [auth r]SCOP2 FamilyRibosomal protein L48052839 4003628 SCOP2 (2022-06-29)
OA [auth r]SCOP2 Superfamily60S ribosomal protein L4 C-terminal domain-like8052840 3002143 SCOP2 (2022-06-29)
OA [auth r]SCOP2 SuperfamilyRibosomal protein L48052841 3001146 SCOP2 (2022-06-29)
QA [auth u]SCOP2 FamilyRibosomal protein L5e and archael L18-like8049685 4006591 SCOP2 (2022-06-29)
QA [auth u]SCOP2 SuperfamilyTranslational machinery components8052883 3000571 SCOP2 (2022-06-29)
RA [auth v]SCOP2 FamilyRibosomal protein L6e8048638 4006169 SCOP2 (2022-06-29)
RA [auth v]SCOP2 SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053103 3000334 SCOP2 (2022-06-29)
SA [auth w]SCOP2 FamilyRibosomal protein L30p/L7e8052939 4001360 SCOP2 (2022-06-29)
SA [auth w]SCOP2 FamilyRibosomal L30p/L7e protein N-terminal domain-lke8050359 4006854 SCOP2 (2022-06-29)
SA [auth w]SCOP2 SuperfamilyRibosomal protein L30p/L7e8052941 3001378 SCOP2 (2022-06-29)
SA [auth w]SCOP2 SuperfamilyRibosomal L30p/L7e protein N-terminal domain-lke8052940 3002152 SCOP2 (2022-06-29)
ISCOP2 FamilyRibosomal proteins L15p and L18e8046509 4003555 SCOP2 (2022-06-29)
ISCOP2 SuperfamilyRibosomal proteins L15p and L18e8095975 3001045 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
K [auth N]PF01294e5t5hN1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: PF01294ECOD (1.6)
L [auth O]PF00572e5t5hO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
M [auth P]PF00467,PF01929e5t5hP1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01929ECOD (1.6)
N [auth Q]PF00827e5t5hQ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00827ECOD (1.6)
O [auth R]PF00237e5t5hR1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
P [auth S]F_UNCLASSIFIEDe5t5hS2 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: F_UNCLASSIFIEDECOD (1.6)
P [auth S]PF01775e5t5hS1 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: PF01775ECOD (1.6)
Q [auth T]PF01280e5t5hT1 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: PF01280ECOD (1.6)
Q [auth T]PF01280e5t5hT2 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: PF01280ECOD (1.6)
R [auth U]PF01157e5t5hU1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01157ECOD (1.6)
S [auth V]PF01776e5t5hV1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: PF01776ECOD (1.6)
T [auth W]PF00238e5t5hW1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
U [auth X]PF00276e5t5hX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276ECOD (1.6)
V [auth Y]PF01246e5t5hY1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01246ECOD (1.6)
W [auth Z]PF16906e5t5hZ1 A: beta barrelsX: SH3H: SH3T: SH3F: PF16906ECOD (1.6)
X [auth a]PF00467,PF01777e5t5ha1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01777ECOD (1.6)
Y [auth b]PF00828e5t5hb1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
Z [auth c]PF01778e5t5hc1 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: PF01778ECOD (1.6)
AA [auth d]PF01779e5t5hd1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: PF01779ECOD (1.6)
BA [auth e]PF00181e5t5he1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
BA [auth e]PF03947e5t5he2 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
CA [auth f]PF00297e5t5hf1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
DA [auth g]PF01248e5t5hg1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
EA [auth h]PF01198e5t5hh1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: PF01198ECOD (1.6)
FA [auth i]PF01655e5t5hi1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: PF01655ECOD (1.6)
GA [auth j]PF01199e5t5hj1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: PF01199ECOD (1.6)
HA [auth k]PF00831e5t5hk1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
IA [auth l]PF01247e5t5hl1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF01247ECOD (1.6)
JA [auth m]PF01158e5t5hm1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: PF01158ECOD (1.6)
KA [auth n]PF01907e5t5hn1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01907ECOD (1.6)
LA [auth o]PF01780e5t5ho1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01780ECOD (1.6)
MA [auth p]PF01781e5t5hp1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: PF01781ECOD (1.6)
NA [auth q]PF00832e5t5hq1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: PF00832ECOD (1.6)
OA [auth r]PF00573,PF14374e5t5hr3 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573,PF14374ECOD (1.6)
OA [auth r]PF14374e5t5hr2 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: PF14374ECOD (1.6)
PA [auth t]PF00935e5t5ht1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00935ECOD (1.6)
QA [auth u]PF17144e5t5hu1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF17144ECOD (1.6)
RA [auth v]PF01159e5t5hv1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01159ECOD (1.6)
SA [auth w]PF00327,PF08079e5t5hw1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327,PF08079ECOD (1.6)
TA [auth x]PF01248e5t5hx1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
IPF17135e5t5hI1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF17135ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
J [auth L]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
K [auth N]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
L [auth O]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
M [auth P]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
M [auth P]PF00467KOW motif (KOW)KOW motif- Family
N [auth Q]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
O [auth R]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
P [auth S]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
Q [auth T]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
R [auth U]PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
S [auth V]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
T [auth W]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
U [auth X]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
V [auth Y]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
W [auth Z]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
W [auth Z]PF00467KOW motif (KOW)KOW motif- Family
X [auth a]PF00467KOW motif (KOW)KOW motif- Family
Y [auth b]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
Z [auth c]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
AA [auth d]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
BA [auth e]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
BA [auth e]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
CA [auth f]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
DA [auth g]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
FA [auth i]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
GA [auth j]PF01199Ribosomal protein L34e (Ribosomal_L34e)Ribosomal protein L34e- Family
HA [auth k]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
IA [auth l]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
JA [auth m]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
KA [auth n]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
LA [auth o]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
MA [auth p]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
NA [auth q]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
OA [auth r]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
OA [auth r]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
PA [auth t]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
QA [auth u]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
QA [auth u]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins.Domain
RA [auth v]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
SA [auth w]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
SA [auth w]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
RNA LARGE SUBUNIT ALPHA---
J [auth L]60S ribosomal protein L11
K [auth N]60S ribosomal protein L13
L [auth O]60S ribosomal protein L13a
M [auth P]40S ribosomal protein L14
N [auth Q]Ribosomal protein L15
O [auth R]60S ribosomal protein L17
P [auth S]60S ribosomal protein L18a
Q [auth T]Ribosomal protein L19-like protein
R [auth U]Ribosomal protein L21E (60S)
S [auth V]60S ribosomal protein L22
RNA LARGE SUBUNIT BETA---
T [auth W]60S ribosomal protein L23
U [auth X]60S ribosomal protein L23a
V [auth Y]Ribosomal protein L24- -
W [auth Z]60S ribosomal protein L26
X [auth a]Ribosomal protein L27
Y [auth b]60S ribosomal protein L27A/L29
Z [auth c]60S ribosomal protein L28
AA [auth d]Ribosomal protein L29
BA [auth e]60S ribosomal protein L2
CA [auth f]Ribosomal protein L13
5.8S rRNA---
DA [auth g]60S ribosomal protein L30 -
EA [auth h]60S ribosomal subunit protein L31
FA [auth i]60S ribosomal protein L32
GA [auth j]60S ribosomal protein L34
HA [auth k]60S ribosomal protein L35
IA [auth l]Ribosomal protein L35A
JA [auth m]Ribosomal protein L36
KA [auth n]Ribosomal protein L37
LA [auth o]60S ribosomal protein L37a
MA [auth p]Ribosomal protein L38
5S rRNA---
NA [auth q]Ribosomal protein L39
OA [auth r]60S ribosomal protein L4
PA [auth t]60S ribosomal protein L44
QA [auth u]60S ribosomal protein L5
RA [auth v]60S ribosomal protein L6
SA [auth w]60S ribosomal protein L7
TA [auth x]Ribosomal protein L7a-like protein -
srRNA1---
srRNA3---
srRNA2---
srRNA4---
60S ribosomal protein L18

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth L]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
J [auth L]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
J [auth L]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
J [auth L]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
J [auth L]IPR002132Large ribosomal subunit protein uL5Family
K [auth N]IPR001380Large ribosomal subunit protein eL13Family
K [auth N]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
L [auth O]IPR005822Large ribosomal subunit protein uL13Family
L [auth O]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
L [auth O]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
M [auth P]IPR039660Large ribosomal subunit protein eL14Family
M [auth P]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
M [auth P]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
M [auth P]IPR002784Large ribosomal subunit protein eL14 domainDomain
M [auth P]IPR005824KOWDomain
M [auth P]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
N [auth Q]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
N [auth Q]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
N [auth Q]IPR000439Large ribosomal subunit protein eL15Family
O [auth R]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
O [auth R]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
O [auth R]IPR001063Large ribosomal subunit protein uL22Family
O [auth R]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
P [auth S]IPR028877Large ribosomal subunit protein eL20Family
P [auth S]IPR023573Large ribosomal subunit protein eL20 domainDomain
P [auth S]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
Q [auth T]IPR039547Large ribosomal subunit protein eL19Family
Q [auth T]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
Q [auth T]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
Q [auth T]IPR005819Linker histone H1/H5Family
Q [auth T]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
Q [auth T]IPR000196Large ribosomal subunit protein eL19 domainDomain
R [auth U]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
R [auth U]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
R [auth U]IPR001147Large ribosomal subunit protein eL21Family
R [auth U]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
S [auth V]IPR002671Large ribosomal subunit protein eL22Family
S [auth V]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
T [auth W]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
T [auth W]IPR000218Large ribosomal subunit protein uL14Family
T [auth W]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
U [auth X]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
U [auth X]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
U [auth X]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
U [auth X]IPR013025Large ribosomal subunit protein uL23-likeFamily
V [auth Y]IPR000988Large ribosomal subunit protein eL24-relatedFamily
V [auth Y]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
W [auth Z]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
W [auth Z]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
W [auth Z]IPR005824KOWDomain
W [auth Z]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
W [auth Z]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
X [auth a]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
X [auth a]IPR005824KOWDomain
X [auth a]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
X [auth a]IPR001141Large ribosomal subunit protein eL27Family
X [auth a]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
Y [auth b]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
Y [auth b]IPR021131Large ribosomal subunit protein uL15/eL18Domain
Y [auth b]IPR030878Large ribosomal subunit protein uL15Family
Y [auth b]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
Z [auth c]IPR029004Ribosomal eL28/Mak16Domain
Z [auth c]IPR002672Large ribosomal subunit protein eL28Family
AA [auth d]IPR002673Large ribosomal subunit protein eL29Family
BA [auth e]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
BA [auth e]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
BA [auth e]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
BA [auth e]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
BA [auth e]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
BA [auth e]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
BA [auth e]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
BA [auth e]IPR002171Large ribosomal subunit protein uL2Family
CA [auth f]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
CA [auth f]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
CA [auth f]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
CA [auth f]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
CA [auth f]IPR000597Large ribosomal subunit protein uL3Family
DA [auth g]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
DA [auth g]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
DA [auth g]IPR039109Large ribosomal subunit protein eL30-likeFamily
DA [auth g]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
EA [auth h]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
EA [auth h]IPR000054Large ribosomal subunit protein eL31Family
FA [auth i]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
FA [auth i]IPR001515Large ribosomal subunit protein eL32Family
GA [auth j]IPR008195Large ribosomal subunit protein eL34Family
HA [auth k]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
HA [auth k]IPR001854Large ribosomal subunit protein uL29Family
HA [auth k]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
IA [auth l]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
IA [auth l]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
IA [auth l]IPR001780Large ribosomal subunit protein eL33Family
JA [auth m]IPR000509Large ribosomal subunit protein eL36Family
JA [auth m]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
KA [auth n]IPR001569Large ribosomal subunit protein eL37Family
KA [auth n]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
KA [auth n]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
KA [auth n]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
LA [auth o]IPR002674Large ribosomal subunit protein eL43Family
LA [auth o]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
LA [auth o]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
MA [auth p]IPR002675Large ribosomal subunit protein eL38Family
MA [auth p]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
NA [auth q]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
NA [auth q]IPR000077Large ribosomal subunit protein eL39Family
NA [auth q]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
OA [auth r]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
OA [auth r]IPR002136Large ribosomal subunit protein uL4Family
OA [auth r]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
OA [auth r]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
OA [auth r]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
PA [auth t]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
PA [auth t]IPR000552Large ribosomal subunit protein eL42Family
QA [auth u]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
QA [auth u]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
RA [auth v]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
RA [auth v]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
RA [auth v]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
RA [auth v]IPR000915Large ribosomal subunit protein eL6Family
SA [auth w]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
SA [auth w]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
SA [auth w]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
SA [auth w]IPR039699Large ribosomal subunit protein uL30Family
SA [auth w]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
SA [auth w]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
SA [auth w]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
TA [auth x]IPR001921Large ribosomal subunit protein eL8Family
TA [auth x]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
TA [auth x]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
TA [auth x]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
IPR021131Large ribosomal subunit protein uL15/eL18Domain
IPR000039Large ribosomal subunit protein eL18Family
IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily