Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AHanta_G1_2nde5opgA2 A: beta barrelsX: SH3H: Hantavirus structural glycoprotein Gn ectodomain subdomain II (From Topology)T: Hantavirus structural glycoprotein Gn ectodomain subdomain IIF: Hanta_G1_2ndECOD (1.6)
AHanta_G1_3rde5opgA3 A: beta barrelsX: Hantavirus structural glycoprotein Gn ectodomain subdomain III (From Topology)H: Hantavirus structural glycoprotein Gn ectodomain subdomain III (From Topology)T: Hantavirus structural glycoprotein Gn ectodomain subdomain IIIF: Hanta_G1_3rdECOD (1.6)
AHanta_G1_1ste5opgA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Hanta_G1_1stECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF01567Hantavirus glycoprotein Gn, head (Hanta_Gn-H)Hantavirus glycoprotein Gn, headThe medium (M) genome segment of hantaviruses (family Bunyaviridae) encodes the two virion glycoproteins, Gn and Gc (also known as G1 and G2, respectively), as a polyprotein precursor [1,2,3]. Gn and Gc forms homotetramers (spikes) at the surface of ...The medium (M) genome segment of hantaviruses (family Bunyaviridae) encodes the two virion glycoproteins, Gn and Gc (also known as G1 and G2, respectively), as a polyprotein precursor [1,2,3]. Gn and Gc forms homotetramers (spikes) at the surface of the virion which attach the virion to host cell receptors including integrin beta3/ITGB3 induce internalisation, predominantly through clathrin-dependent endocytosis [3,4]. This entry represents the N-terminal two-thirds of the Gn glycoprotein ectodomain, denoted as 'head' (Gn-H) [2] which interacts with Gc ectodomain. Release of Gn-H at acid pH induces a further conformational change of the Gc domain II tip which exposes non-polar side chains for insertion into the endosomal membrane [2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
envelope glycoprotein Gn