5OEJ

Structure of Tra1 subunit within the chromatin modifying complex SAGA

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth B]PF02259e5oejB3 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: PF02259ECOD (1.6)
A [auth B]PF20175e5oejB4 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: PF20175ECOD (1.6)
A [auth B]PF20206e5oejB2 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: PF20206ECOD (1.6)
A [auth B]PF00454,PF02260e5oejB1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: PF00454,PF02260ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth B]PF20206Tra1 HEAT repeat ring region (Tra1_ring)Tra1 HEAT repeat ring region- Repeat
A [auth B]PF00454Phosphatidylinositol 3- and 4-kinase (PI3_PI4_kinase)Phosphatidylinositol 3- and 4-kinase- Family
A [auth B]PF02259FAT domain (FAT)FAT domain- Repeat

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth B]IPR014009PIK-related kinaseDomain
A [auth B]IPR016024Armadillo-type foldHomologous Superfamily
A [auth B]IPR046805Tra1, HEAT repeat ring regionRepeat
A [auth B]IPR003152FATC domainDomain
A [auth B]IPR000403Phosphatidylinositol 3-/4-kinase, catalytic domainDomain
A [auth B]IPR003151PIK-related kinase, FATDomain
A [auth B]IPR046807Tra1, HEAT repeat central regionRepeat
A [auth B]IPR036940Phosphatidylinositol 3-/4-kinase, catalytic domain superfamilyHomologous Superfamily
A [auth B]IPR011009Protein kinase-like domain superfamilyHomologous Superfamily