5NEN

Crystal structure of the soluble domain of LipC, a membrane fusion protein of a type I secretion system

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	HlyD-like secretion proteins	8074127	4003003	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Single hybrid motif	8092215	3001880	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	F_UNCLASSIFIED	e5nenA2	A: alpha bundles	X: helical hairpin of HlyD-like secretion proteins (From Topology)	H: helical hairpin of HlyD-like secretion proteins (From Topology)	T: helical hairpin of HlyD-like secretion proteins	F: F_UNCLASSIFIED	ECOD (1.6)
A	PF13437,PF13533	e5nenA1	A: a+b complex topology	X: alpha/beta-Hammerhead/Barrel-sandwich hybrid	H: alpha/beta-Hammerhead/Barrel-sandwich hybrid	T: Single hybrid motif	F: PF13437,PF13533	ECOD (1.6)
B	F_UNCLASSIFIED	e5nenB1	A: alpha bundles	X: helical hairpin of HlyD-like secretion proteins (From Topology)	H: helical hairpin of HlyD-like secretion proteins (From Topology)	T: helical hairpin of HlyD-like secretion proteins	F: F_UNCLASSIFIED	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00529	Cation efflux system protein CusB domain 1 (CusB_dom_1)	Cation efflux system protein CusB domain 1	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Lipase C	-	transmembrane transport localization transport cellular process establishment of localization protein localization establishment of protein localization cellular localization nitrogen compound transport secretion organic substance transport establishment of protein localization to extracellular region export from cell protein secretion transmembrane transport localization transport cellular process establishment of localization protein localization establishment of protein localization cellular localization nitrogen compound transport secretion organic substance transport establishment of protein localization to extracellular region export from cell protein secretion protein localization to extracellular region secretion by cell protein transport cellular macromolecule localization macromolecule localization	cell periphery plasma membrane membrane cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR010129	Type I secretion membrane fusion protein, HlyD family	Family
A, B	IPR043602	Cation efflux system protein CusB, domain 1	Domain
A, B	IPR006144	Secretion protein HlyD, conserved site	Conserved Site

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.