Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B Superfamilyt-snare proteins8080101 3000366 SCOP2B (2022-06-29)
CSCOP2B Superfamilyt-snare proteins8080101 3000366 SCOP2B (2022-06-29)
ESCOP2B Superfamilyt-snare proteins8080101 3000366 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00804e5m4yA1 A: alpha bundlesX: STAT-likeH: t-snare proteins (From Topology)T: t-snare proteinsF: PF00804ECOD (1.6)
CPF00804e5m4yC1 A: alpha bundlesX: STAT-likeH: t-snare proteins (From Topology)T: t-snare proteinsF: PF00804ECOD (1.6)
EPF00804e5m4yE1 A: alpha bundlesX: STAT-likeH: t-snare proteins (From Topology)T: t-snare proteinsF: PF00804ECOD (1.6)
BPF15277e5m4yB1 A: beta barrelsX: PH domain-likeH: PH domain-like (From Topology)T: PH domain-likeF: PF15277ECOD (1.6)
DPF15277e5m4yD1 A: beta barrelsX: PH domain-likeH: PH domain-like (From Topology)T: PH domain-likeF: PF15277ECOD (1.6)
FPF15277e5m4yF1 A: beta barrelsX: PH domain-likeH: PH domain-like (From Topology)T: PH domain-likeF: PF15277ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.20.58.70 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
C1.20.58.70 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
E1.20.58.70 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
B2.30.29.90 Mainly Beta Roll PH-domain like CATH (4.3.0)
D2.30.29.90 Mainly Beta Roll PH-domain like CATH (4.3.0)
F2.30.29.90 Mainly Beta Roll PH-domain like CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C, E
PF00804Syntaxin (Syntaxin)SyntaxinSyntaxins are the prototype family of SNARE proteins. They usually consist of three main regions - a C-terminal transmembrane region, a central SNARE domain which is characteristic of and conserved in all syntaxins (Pfam:PF05739), and an N-terminal d ...Syntaxins are the prototype family of SNARE proteins. They usually consist of three main regions - a C-terminal transmembrane region, a central SNARE domain which is characteristic of and conserved in all syntaxins (Pfam:PF05739), and an N-terminal domain that is featured in this entry. This domain varies between syntaxin isoforms; in syntaxin 1A (Swiss:O35526) it is found as three alpha-helices with a left-handed twist. It may fold back on the SNARE domain to allow the molecule to adopt a 'closed' configuration that prevents formation of the core fusion complex - it thus has an auto-inhibitory role. The function of syntaxins is determined by their localisation. They are involved in neuronal exocytosis, ER-Golgi transport and Golgi-endosome transport, for example. They also interact with other proteins as well as those involved in SNARE complexes. These include vesicle coat proteins, Rab GTPases, and tethering factors [6].
Domain
B, D, F
PF15277Exocyst complex component SEC3 N-terminal PIP2 binding PH (Sec3-PIP2_bind)Exocyst complex component SEC3 N-terminal PIP2 binding PHThis is the N-terminal domain of fungal and eukaryotic Sec3 proteins. Sec3 is a component of the exocyst complex that is involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.This N-terminal domain contains a cryptic p ...This is the N-terminal domain of fungal and eukaryotic Sec3 proteins. Sec3 is a component of the exocyst complex that is involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.This N-terminal domain contains a cryptic pleckstrin homology (PH) fold, and all six positively charged lysine and arginine residues in the PH domain predicted to bind the PIP2 head group are conserved. The exocyst complex is essential for many exocytic events, by tethering vesicles at the plasma membrane for fusion. In fission yeast, polarised exocytosis for growth relies on the combined action of the exocyst at cell poles and myosin-driven transport along actin cables [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C, E
Protein SSO2
B, D, F
Exocyst complex component SEC3