5LP3
Three tetrameric rings of Isoaspartyl Dipeptidase fitted in an EM volume.
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth B] | SCOP2B Superfamily | Metallo-dependent hydrolases | 8034168 | 3000428 | SCOP2B (2022-06-29) |
A [auth B] | SCOP2B Superfamily | Composite domain of metallo-dependent hydrolases | 8034166 | 3000176 | SCOP2B (2022-06-29) |
A [auth B] | SCOP2B Superfamily | Composite domain of metallo-dependent hydrolases | 8034166 | 3000176 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | Composite domain of metallo-dependent hydrolases | 8034166 | 3000176 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | Metallo-dependent hydrolases | 8034168 | 3000428 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | Composite domain of metallo-dependent hydrolases | 8034166 | 3000176 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2B Superfamily | Composite domain of metallo-dependent hydrolases | 8034166 | 3000176 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2B Superfamily | Metallo-dependent hydrolases | 8034168 | 3000428 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2B Superfamily | Composite domain of metallo-dependent hydrolases | 8034166 | 3000176 | SCOP2B (2022-06-29) |
D [auth E] | SCOP2B Superfamily | Metallo-dependent hydrolases | 8034168 | 3000428 | SCOP2B (2022-06-29) |
D [auth E] | SCOP2B Superfamily | Composite domain of metallo-dependent hydrolases | 8034166 | 3000176 | SCOP2B (2022-06-29) |
D [auth E] | SCOP2B Superfamily | Composite domain of metallo-dependent hydrolases | 8034166 | 3000176 | SCOP2B (2022-06-29) |
E [auth A] | SCOP2B Superfamily | Composite domain of metallo-dependent hydrolases | 8034166 | 3000176 | SCOP2B (2022-06-29) |
E [auth A] | SCOP2B Superfamily | Composite domain of metallo-dependent hydrolases | 8034166 | 3000176 | SCOP2B (2022-06-29) |
E [auth A] | SCOP2B Superfamily | Metallo-dependent hydrolases | 8034168 | 3000428 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Composite domain of metallo-dependent hydrolases | 8034166 | 3000176 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Composite domain of metallo-dependent hydrolases | 8034166 | 3000176 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Metallo-dependent hydrolases | 8034168 | 3000428 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Metallo-dependent hydrolases | 8034168 | 3000428 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Composite domain of metallo-dependent hydrolases | 8034166 | 3000176 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Composite domain of metallo-dependent hydrolases | 8034166 | 3000176 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Composite domain of metallo-dependent hydrolases | 8034166 | 3000176 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Composite domain of metallo-dependent hydrolases | 8034166 | 3000176 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Metallo-dependent hydrolases | 8034168 | 3000428 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | Composite domain of metallo-dependent hydrolases | 8034166 | 3000176 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | Metallo-dependent hydrolases | 8034168 | 3000428 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | Composite domain of metallo-dependent hydrolases | 8034166 | 3000176 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | Metallo-dependent hydrolases | 8034168 | 3000428 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | Composite domain of metallo-dependent hydrolases | 8034166 | 3000176 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | Composite domain of metallo-dependent hydrolases | 8034166 | 3000176 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | Composite domain of metallo-dependent hydrolases | 8034166 | 3000176 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | Composite domain of metallo-dependent hydrolases | 8034166 | 3000176 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | Metallo-dependent hydrolases | 8034168 | 3000428 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | Composite domain of metallo-dependent hydrolases | 8034166 | 3000176 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | Composite domain of metallo-dependent hydrolases | 8034166 | 3000176 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | Metallo-dependent hydrolases | 8034168 | 3000428 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | F_UNCLASSIFIED | e5lp3B1 | A: beta sandwiches | X: Composite domain of metallo-dependent hydrolases (From Topology) | H: Composite domain of metallo-dependent hydrolases (From Topology) | T: Composite domain of metallo-dependent hydrolases | F: F_UNCLASSIFIED | ECOD (1.6) |
A [auth B] | F_UNCLASSIFIED | e5lp3B2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: F_UNCLASSIFIED | ECOD (1.6) |
B [auth C] | F_UNCLASSIFIED | e5lp3C1 | A: beta sandwiches | X: Composite domain of metallo-dependent hydrolases (From Topology) | H: Composite domain of metallo-dependent hydrolases (From Topology) | T: Composite domain of metallo-dependent hydrolases | F: F_UNCLASSIFIED | ECOD (1.6) |
B [auth C] | F_UNCLASSIFIED | e5lp3C2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: F_UNCLASSIFIED | ECOD (1.6) |
C [auth D] | F_UNCLASSIFIED | e5lp3D2 | A: beta sandwiches | X: Composite domain of metallo-dependent hydrolases (From Topology) | H: Composite domain of metallo-dependent hydrolases (From Topology) | T: Composite domain of metallo-dependent hydrolases | F: F_UNCLASSIFIED | ECOD (1.6) |
C [auth D] | F_UNCLASSIFIED | e5lp3D1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: F_UNCLASSIFIED | ECOD (1.6) |
D [auth E] | F_UNCLASSIFIED | e5lp3E1 | A: beta sandwiches | X: Composite domain of metallo-dependent hydrolases (From Topology) | H: Composite domain of metallo-dependent hydrolases (From Topology) | T: Composite domain of metallo-dependent hydrolases | F: F_UNCLASSIFIED | ECOD (1.6) |
D [auth E] | F_UNCLASSIFIED | e5lp3E2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: F_UNCLASSIFIED | ECOD (1.6) |
E [auth A] | F_UNCLASSIFIED | e5lp3A1 | A: beta sandwiches | X: Composite domain of metallo-dependent hydrolases (From Topology) | H: Composite domain of metallo-dependent hydrolases (From Topology) | T: Composite domain of metallo-dependent hydrolases | F: F_UNCLASSIFIED | ECOD (1.6) |
E [auth A] | F_UNCLASSIFIED | e5lp3A2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: F_UNCLASSIFIED | ECOD (1.6) |
F | F_UNCLASSIFIED | e5lp3F1 | A: beta sandwiches | X: Composite domain of metallo-dependent hydrolases (From Topology) | H: Composite domain of metallo-dependent hydrolases (From Topology) | T: Composite domain of metallo-dependent hydrolases | F: F_UNCLASSIFIED | ECOD (1.6) |
F | F_UNCLASSIFIED | e5lp3F2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: F_UNCLASSIFIED | ECOD (1.6) |
G | F_UNCLASSIFIED | e5lp3G2 | A: beta sandwiches | X: Composite domain of metallo-dependent hydrolases (From Topology) | H: Composite domain of metallo-dependent hydrolases (From Topology) | T: Composite domain of metallo-dependent hydrolases | F: F_UNCLASSIFIED | ECOD (1.6) |
G | F_UNCLASSIFIED | e5lp3G1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: F_UNCLASSIFIED | ECOD (1.6) |
H | F_UNCLASSIFIED | e5lp3H1 | A: beta sandwiches | X: Composite domain of metallo-dependent hydrolases (From Topology) | H: Composite domain of metallo-dependent hydrolases (From Topology) | T: Composite domain of metallo-dependent hydrolases | F: F_UNCLASSIFIED | ECOD (1.6) |
H | F_UNCLASSIFIED | e5lp3H2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: F_UNCLASSIFIED | ECOD (1.6) |
I | F_UNCLASSIFIED | e5lp3I1 | A: beta sandwiches | X: Composite domain of metallo-dependent hydrolases (From Topology) | H: Composite domain of metallo-dependent hydrolases (From Topology) | T: Composite domain of metallo-dependent hydrolases | F: F_UNCLASSIFIED | ECOD (1.6) |
I | F_UNCLASSIFIED | e5lp3I2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: F_UNCLASSIFIED | ECOD (1.6) |
J | F_UNCLASSIFIED | e5lp3J2 | A: beta sandwiches | X: Composite domain of metallo-dependent hydrolases (From Topology) | H: Composite domain of metallo-dependent hydrolases (From Topology) | T: Composite domain of metallo-dependent hydrolases | F: F_UNCLASSIFIED | ECOD (1.6) |
J | F_UNCLASSIFIED | e5lp3J1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: F_UNCLASSIFIED | ECOD (1.6) |
K | F_UNCLASSIFIED | e5lp3K1 | A: beta sandwiches | X: Composite domain of metallo-dependent hydrolases (From Topology) | H: Composite domain of metallo-dependent hydrolases (From Topology) | T: Composite domain of metallo-dependent hydrolases | F: F_UNCLASSIFIED | ECOD (1.6) |
K | F_UNCLASSIFIED | e5lp3K2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: F_UNCLASSIFIED | ECOD (1.6) |
L | F_UNCLASSIFIED | e5lp3L1 | A: beta sandwiches | X: Composite domain of metallo-dependent hydrolases (From Topology) | H: Composite domain of metallo-dependent hydrolases (From Topology) | T: Composite domain of metallo-dependent hydrolases | F: F_UNCLASSIFIED | ECOD (1.6) |
L | F_UNCLASSIFIED | e5lp3L2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: F_UNCLASSIFIED | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01979 | Amidohydrolase family (Amidohydro_1) | Amidohydrolase family | This family of enzymes are a a large metal dependent hydrolase superfamily [1]. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilisatio ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR006680 | Amidohydrolase-related | Domain | |
IPR011059 | Metal-dependent hydrolase, composite domain superfamily | Homologous Superfamily | |
IPR032466 | Metal-dependent hydrolase | Homologous Superfamily | |
IPR010229 | Peptidase M38, beta-aspartyl dipeptidase | Family | |
IPR033826 | Isoaspartyl-dipeptidase | Family |