5K1Y
P2(1) Structure of pNOB8 AspA-DNA complex
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth C] | PF01978 | e5k1yC1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF01978 | ECOD (1.6) |
C [auth A] | PF01978 | e5k1yA1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF01978 | ECOD (1.6) |
D [auth B] | PF01978 | e5k1yB1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF01978 | ECOD (1.6) |
B [auth D] | PF01978 | e5k1yD1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF01978 | ECOD (1.6) |
G [auth E] | PF01978 | e5k1yE1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF01978 | ECOD (1.6) |
H [auth F] | PF01978 | e5k1yF1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF01978 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01978 | Sugar-specific transcriptional regulator TrmB (TrmB) | Sugar-specific transcriptional regulator TrmB | One member of this family, TrmB, has been shown to be a sugar-specific transcriptional regulator of the trehalose/maltose ABC transporter [2] in Thermococcus litoralis. | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
AspA | - | - | ||
E [auth P] | DNA (33-MER) | - | - | - |
F [auth N] | DNA (33-MER) | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001845 | HTH ArsR-type DNA-binding domain | Domain | |
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR011991 | ArsR-like helix-turn-helix domain | Domain | |
IPR002831 | Transcription regulator TrmB, N-terminal | Domain | |
IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |