5IXL
Structure of P. vulgaris HigB toxin Y91A variant
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | RelE-like | 8102970 | 3000741 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | RelE-like | 8102970 | 3000741 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | RelE-like | 8102970 | 3000741 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | RelE-like | 8102970 | 3000741 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | RelE-like | 8102970 | 3000741 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | RelE-like | 8102970 | 3000741 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | RelE-like | 8102970 | 3000741 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | RelE-like | 8102970 | 3000741 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF05015 | e5ixlA1 | A: a+b two layers | X: RelE-like | H: RelE-like (From Topology) | T: RelE-like | F: PF05015 | ECOD (1.6) |
B | PF05015 | e5ixlB1 | A: a+b two layers | X: RelE-like | H: RelE-like (From Topology) | T: RelE-like | F: PF05015 | ECOD (1.6) |
C | PF05015 | e5ixlC1 | A: a+b two layers | X: RelE-like | H: RelE-like (From Topology) | T: RelE-like | F: PF05015 | ECOD (1.6) |
D | PF05015 | e5ixlD1 | A: a+b two layers | X: RelE-like | H: RelE-like (From Topology) | T: RelE-like | F: PF05015 | ECOD (1.6) |
E | PF05015 | e5ixlE1 | A: a+b two layers | X: RelE-like | H: RelE-like (From Topology) | T: RelE-like | F: PF05015 | ECOD (1.6) |
F | PF05015 | e5ixlF1 | A: a+b two layers | X: RelE-like | H: RelE-like (From Topology) | T: RelE-like | F: PF05015 | ECOD (1.6) |
G | PF05015 | e5ixlG1 | A: a+b two layers | X: RelE-like | H: RelE-like (From Topology) | T: RelE-like | F: PF05015 | ECOD (1.6) |
H | PF05015 | e5ixlH1 | A: a+b two layers | X: RelE-like | H: RelE-like (From Topology) | T: RelE-like | F: PF05015 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.2310.20 | Alpha Beta | 2-Layer Sandwich | YaeB-like fold | RelE-like | CATH (4.3.0) |
B | 3.30.2310.20 | Alpha Beta | 2-Layer Sandwich | YaeB-like fold | RelE-like | CATH (4.3.0) |
C | 3.30.2310.20 | Alpha Beta | 2-Layer Sandwich | YaeB-like fold | RelE-like | CATH (4.3.0) |
D | 3.30.2310.20 | Alpha Beta | 2-Layer Sandwich | YaeB-like fold | RelE-like | CATH (4.3.0) |
E | 3.30.2310.20 | Alpha Beta | 2-Layer Sandwich | YaeB-like fold | RelE-like | CATH (4.3.0) |
F | 3.30.2310.20 | Alpha Beta | 2-Layer Sandwich | YaeB-like fold | RelE-like | CATH (4.3.0) |
G | 3.30.2310.20 | Alpha Beta | 2-Layer Sandwich | YaeB-like fold | RelE-like | CATH (4.3.0) |
H | 3.30.2310.20 | Alpha Beta | 2-Layer Sandwich | YaeB-like fold | RelE-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF05015 | RelE-like toxin of type II toxin-antitoxin system HigB (HigB-like_toxin) | RelE-like toxin of type II toxin-antitoxin system HigB | This family carries several different examples of type II bacterial toxins of toxin-antitoxin systems including many HigB-like ones. The fold is referred to as the RelE/YoeB/Txe/Yeeu fold suggesting all examples of these are present in this family. S ... | Domain |