Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF04965e5iw9A1 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: PF04965ECOD (1.6)
BPF04965e5iw9B1 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: PF04965ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.10.450.40 Alpha Beta Roll Nuclear Transport Factor 2 Chain: A,CATH (4.3.0)
B3.10.450.40 Alpha Beta Roll Nuclear Transport Factor 2 Chain: A,CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF04965Baseplate wedge protein gp25 (GPW_gp25)Baseplate wedge protein gp25This family represents T4 phage gp25 protein and gp25-like proteins, found in several systems, including contractile tail bacteriophages, the type VI secretion system (T6SS) and R-type pyocins, which constitute a multiprotein tubular apparatus to att ...This family represents T4 phage gp25 protein and gp25-like proteins, found in several systems, including contractile tail bacteriophages, the type VI secretion system (T6SS) and R-type pyocins, which constitute a multiprotein tubular apparatus to attach to and penetrate host cell membranes. Gp25 is a component of the conserved wedge in the inner part of the baseplate and serves as a nucleus for sheath polymerisation, playing a critical role in sheath assembly and contraction [1,2]. The EPR motif (Glu-Pro-Arg, residues 85-87 of gp25) is conserved across all members of the family including orthologues from the RpoS-mediated general stress response system (called IraD) [3,4]. This motif interacts with the 'core bundle' composed of orthologues of T4 gp6 and gp7 proteins in contractile injection systems.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Baseplate wedge protein gp25- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR007048IraD/Gp25-likeDomain