5FN1

Electron cryo-microscopy of filamentous flexible virus PepMV (Pepino Mosaic Virus)

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyPepMV Coat protein-like8047613 4005718 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyPepMV Coat protein-like8089900 3002401 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00286e5fn1A1 A: alpha complex topologyX: Rift Valley fever virus nucleocapsid protein-related (From Homology)H: Rift Valley fever virus nucleocapsid protein-relatedT: Papaya mosaic virus capsid proteinF: PF00286ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00286Viral coat protein (Flexi_CP)Viral coat proteinFamily includes coat proteins from Potexviruses and carlaviruses.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
COAT PROTEIN -
5'-R(*UP*UP*UP*UP*UP)-3'---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR000052Potex/carlavirus coat proteinDomain