5FKX

Structure of E.coli inducible lysine decarboxylase at active pH


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF03711e5fkxA3 A: a+b two layersX: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase (From Topology)H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase (From Topology)T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: PF03711ECOD (1.6)
APF01276e5fkxA4 A: a+b two layersX: C-terminal domain in some PLP-dependent transferases (From Topology)H: C-terminal domain in some PLP-dependent transferases (From Topology)T: C-terminal domain in some PLP-dependent transferasesF: PF01276ECOD (1.6)
APF03709e5fkxA1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: CheY-likeF: PF03709ECOD (1.6)
APF01276e5fkxA2 A: a/b three-layered sandwichesX: PLP-dependent transferases (From Topology)H: PLP-dependent transferases (From Topology)T: PLP-dependent transferasesF: PF01276ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF03709Orn/Lys/Arg decarboxylase, N-terminal domain (OKR_DC_1_N)Orn/Lys/Arg decarboxylase, N-terminal domainThis domain has a flavodoxin-like fold, and is termed the "wing" domain because of its position in the overall 3D structure.Domain
PF01276Orn/Lys/Arg decarboxylase, major domain (OKR_DC_1)Orn/Lys/Arg decarboxylase, major domain- Domain
PF03711Orn/Lys/Arg decarboxylase, C-terminal domain (OKR_DC_1_C)Orn/Lys/Arg decarboxylase, C-terminal domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
LYSINE DECARBOXYLASE, INDUCIBLE