5FIQ
Exonuclease domain-containing 1 (Exd1) in the native conformation
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | DNA_pol_A_exo1 | e5fiqA1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: DNA_pol_A_exo1 | ECOD (1.6) |
B [auth C] | DNA_pol_A_exo1 | e5fiqC1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: DNA_pol_A_exo1 | ECOD (1.6) |
C [auth E] | DNA_pol_A_exo1 | e5fiqE1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: DNA_pol_A_exo1 | ECOD (1.6) |
D [auth G] | DNA_pol_A_exo1 | e5fiqG1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: DNA_pol_A_exo1 | ECOD (1.6) |
E [auth I] | DNA_pol_A_exo1 | e5fiqI1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: DNA_pol_A_exo1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B [auth C], C [auth E], D [auth G], E [auth I] | PF01612 | 3'-5' exonuclease (DNA_pol_A_exo1) | 3'-5' exonuclease | This domain is responsible for the 3'-5' exonuclease proofreading activity of E. coli DNA polymerase I (polI) and other enzymes, it catalyses the hydrolysis of unpaired or mismatched nucleotides. This domain consists of the amino-terminal half of the ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B [auth C], C [auth E], D [auth G], E [auth I] | IPR036397 | Ribonuclease H superfamily | Homologous Superfamily |
A, B [auth C], C [auth E], D [auth G], E [auth I] | IPR012337 | Ribonuclease H-like superfamily | Homologous Superfamily |
A, B [auth C], C [auth E], D [auth G], E [auth I] | IPR002562 | 3'-5' exonuclease domain | Domain |