Crystal structure of DapD in complex with succinyl-CoA from Corynebacterium glutamicum
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
A | SCOP2 Family | Tetrahydrodipicolinate N-succinyltransferase Mtb-DapD-like | 8050593 | 4006968 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Trimeric LpxA-like enzymes | 8052857 | 3001804 | SCOP2 (2022-06-29) |
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
A | PF14602 | e5e3qA1 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: PF14602 | ECOD (1.6) |
A | PF14789 | e5e3qA2 | A: a+b complex topology | X: Tetrahydrodipicolinate N-succinyletransferase N-terminal domain (From Topology) | H: Tetrahydrodipicolinate N-succinyletransferase N-terminal domain (From Topology) | T: Tetrahydrodipicolinate N-succinyletransferase N-terminal domain | F: PF14789 | ECOD (1.6) |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
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| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase | | | |
Chains | Accession | Name | Type |
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| IPR011004 | Trimeric LpxA-like superfamily | Homologous Superfamily |
| IPR038361 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily | Homologous Superfamily |
| IPR026586 | Type 2 tetrahydrodipicolinate N-succinyltransferase family | Family |
| IPR019875 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, actinobacteria | Family |
| IPR032784 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain | Domain |
| IPR001451 | Hexapeptide repeat | Repeat |