5D8B

Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatch


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8033194 3000334 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyNucleic acid-binding proteins8033195 3000135 SCOP2B (2022-06-29)
WASCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8033194 3000334 SCOP2B (2022-06-29)
WASCOP2B SuperfamilyNucleic acid-binding proteins8033195 3000135 SCOP2B (2022-06-29)
FBSCOP2B SuperfamilyRibosomal proteins L15p and L18e8033207 3001045 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyRibosomal proteins L15p and L18e8033207 3001045 SCOP2B (2022-06-29)
GBSCOP2B SuperfamilyRibosomal protein L16p/L10e8043627 3000884 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyRibosomal protein L16p/L10e8043627 3000884 SCOP2B (2022-06-29)
HBSCOP2B SuperfamilyProkaryotic ribosomal protein L178032744 3000995 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyProkaryotic ribosomal protein L178032744 3000995 SCOP2B (2022-06-29)
IBSCOP2B SuperfamilyTranslational machinery components8033211 3000571 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyTranslational machinery components8033211 3000571 SCOP2B (2022-06-29)
JBSCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8033214 3000334 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8033214 3000334 SCOP2B (2022-06-29)
KBSCOP2B SuperfamilyRibosomal protein L208033216 3000563 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyRibosomal protein L208033216 3000563 SCOP2B (2022-06-29)
LBSCOP2B Superfamilyl21p-like8033218 3002005 SCOP2B (2022-06-29)
PSCOP2B Superfamilyl21p-like8033218 3002005 SCOP2B (2022-06-29)
MBSCOP2B SuperfamilyRibosomal protein L228033220 3001078 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyRibosomal protein L228033220 3001078 SCOP2B (2022-06-29)
NBSCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8033219 3000210 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8033219 3000210 SCOP2B (2022-06-29)
OBSCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8033223 3000334 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8033223 3000334 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyTranslational proteins8033197 3000811 SCOP2B (2022-06-29)
XASCOP2B SuperfamilyTranslational proteins8033197 3000811 SCOP2B (2022-06-29)
QBSCOP2B SuperfamilyRibosomal L27 protein-like8041210 3000539 SCOP2B (2022-06-29)
USCOP2B SuperfamilyRibosomal L27 protein-like8041210 3000539 SCOP2B (2022-06-29)
RBSCOP2B SuperfamilyL28p-like8042932 3001966 SCOP2B (2022-06-29)
VSCOP2B SuperfamilyL28p-like8042932 3001966 SCOP2B (2022-06-29)
SBSCOP2B SuperfamilyRibosomal protein L29 (L29p)8042933 3000713 SCOP2B (2022-06-29)
WSCOP2B SuperfamilyRibosomal protein L29 (L29p)8042933 3000713 SCOP2B (2022-06-29)
UBSCOP2B SuperfamilyZn-binding ribosomal proteins8033190 3001320 SCOP2B (2022-06-29)
YSCOP2B SuperfamilyZn-binding ribosomal proteins8033190 3001320 SCOP2B (2022-06-29)
VBSCOP2B SuperfamilyZn-binding ribosomal proteins8033191 3001320 SCOP2B (2022-06-29)
ZSCOP2B SuperfamilyZn-binding ribosomal proteins8033191 3001320 SCOP2B (2022-06-29)
BASCOP2B SuperfamilyL35p-like8033192 3000790 SCOP2B (2022-06-29)
XBSCOP2B SuperfamilyL35p-like8033192 3000790 SCOP2B (2022-06-29)
CASCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8044010 3001397 SCOP2B (2022-06-29)
YBSCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8044010 3001397 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyRibosomal protein L48033198 3001146 SCOP2B (2022-06-29)
YASCOP2B SuperfamilyRibosomal protein L48033198 3001146 SCOP2B (2022-06-29)
DASCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II)8044011 3001043 SCOP2B (2022-06-29)
DASCOP2B SuperfamilyRibosomal protein S3 C-terminal domain8044012 3001053 SCOP2B (2022-06-29)
ZBSCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II)8044011 3001043 SCOP2B (2022-06-29)
ZBSCOP2B SuperfamilyRibosomal protein S3 C-terminal domain8044012 3001053 SCOP2B (2022-06-29)
ACSCOP2B SuperfamilyAlpha-L RNA-binding motif8044014 3001473 SCOP2B (2022-06-29)
EASCOP2B SuperfamilyAlpha-L RNA-binding motif8044014 3001473 SCOP2B (2022-06-29)
BCSCOP2B SuperfamilyRibosomal protein S5 domain 2-like8044015 3000100 SCOP2B (2022-06-29)
BCSCOP2B SuperfamilydsRNA-binding domain-like8044017 3000985 SCOP2B (2022-06-29)
FASCOP2B SuperfamilydsRNA-binding domain-like8044017 3000985 SCOP2B (2022-06-29)
FASCOP2B SuperfamilyRibosomal protein S5 domain 2-like8044015 3000100 SCOP2B (2022-06-29)
DCSCOP2B SuperfamilyRibosomal protein S78033523 3000799 SCOP2B (2022-06-29)
HASCOP2B SuperfamilyRibosomal protein S78033523 3000799 SCOP2B (2022-06-29)
FCSCOP2B SuperfamilyRibosomal protein S5 domain 2-like8037678 3000100 SCOP2B (2022-06-29)
JASCOP2B SuperfamilyRibosomal protein S5 domain 2-like8037678 3000100 SCOP2B (2022-06-29)
GCSCOP2B SuperfamilyRibosomal protein S108044019 3001336 SCOP2B (2022-06-29)
KASCOP2B SuperfamilyRibosomal protein S108044019 3001336 SCOP2B (2022-06-29)
HCSCOP2B SuperfamilyTranslational machinery components8044020 3000571 SCOP2B (2022-06-29)
LASCOP2B SuperfamilyTranslational machinery components8044020 3000571 SCOP2B (2022-06-29)
ICSCOP2B SuperfamilyNucleic acid-binding proteins8044021 3000135 SCOP2B (2022-06-29)
MASCOP2B SuperfamilyNucleic acid-binding proteins8044021 3000135 SCOP2B (2022-06-29)
JCSCOP2B SuperfamilyS13-like H2TH domain8003708 3000053 SCOP2B (2022-06-29)
NASCOP2B SuperfamilyS13-like H2TH domain8003708 3000053 SCOP2B (2022-06-29)
KCSCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052585 3000068 SCOP2B (2022-06-29)
OASCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052585 3000068 SCOP2B (2022-06-29)
MCSCOP2B SuperfamilyRibosomal protein S168044025 3000680 SCOP2B (2022-06-29)
QASCOP2B SuperfamilyRibosomal protein S168044025 3000680 SCOP2B (2022-06-29)
NCSCOP2B SuperfamilyNucleic acid-binding proteins8044026 3000135 SCOP2B (2022-06-29)
RASCOP2B SuperfamilyNucleic acid-binding proteins8044026 3000135 SCOP2B (2022-06-29)
OCSCOP2B SuperfamilyRibosomal protein S188044028 3001191 SCOP2B (2022-06-29)
SASCOP2B SuperfamilyRibosomal protein S188044028 3001191 SCOP2B (2022-06-29)
PCSCOP2B SuperfamilyRibosomal protein S198044027 3000686 SCOP2B (2022-06-29)
TASCOP2B SuperfamilyRibosomal protein S198044027 3000686 SCOP2B (2022-06-29)
QCSCOP2B SuperfamilyRibosomal protein S208044029 3001362 SCOP2B (2022-06-29)
UASCOP2B SuperfamilyRibosomal protein S208044029 3001362 SCOP2B (2022-06-29)
ABSCOP2B SuperfamilyRibosomal protein L68033203 3000724 SCOP2B (2022-06-29)
ABSCOP2B SuperfamilyRibosomal protein L68033202 3000724 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyRibosomal protein L68033203 3000724 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyRibosomal protein L68033202 3000724 SCOP2B (2022-06-29)
BBSCOP2B SuperfamilyRibosomal protein L9 C-domain8042934 3000329 SCOP2B (2022-06-29)
BBSCOP2B SuperfamilyL9 N-domain-like8042935 3000338 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyRibosomal protein L9 C-domain8042934 3000329 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyL9 N-domain-like8042935 3000338 SCOP2B (2022-06-29)
DBSCOP2B SuperfamilyRibosomal protein L138033205 3001134 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyRibosomal protein L138033205 3001134 SCOP2B (2022-06-29)
EBSCOP2B Superfamily50S Ribosomal protein L14-like8042936 3000433 SCOP2B (2022-06-29)
ISCOP2B Superfamily50S Ribosomal protein L14-like8042936 3000433 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ARibosomal_L2_1e5d8bA2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
ARibosomal_L2_Ce5d8bA1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
WARibosomal_L2_1e5d8bWA1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
WARibosomal_L2_Ce5d8bWA2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
FBRibosomal_L27Ae5d8bFB1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
JRibosomal_L27Ae5d8bJ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
GBRibosomal_L16e5d8bGB1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
KRibosomal_L16e5d8bK1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
HBRibosomal_L17_1e5d8bHB1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
LRibosomal_L17_1e5d8bL1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
IBRibosomal_L18pe5d8bIB1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
MRibosomal_L18pe5d8bM1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
JBRibosomal_L19e5d8bJB1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
NRibosomal_L19e5d8bN1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
KBRibosomal_L20e5d8bKB1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
ORibosomal_L20e5d8bO1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
LBRibosomal_L21pe5d8bLB1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
PRibosomal_L21pe5d8bP1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
MBRibosomal_L22e5d8bMB1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
QRibosomal_L22e5d8bQ1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
NBRibosomal_L23_2e5d8bNB1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
RRibosomal_L23_2e5d8bR1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
OBribosomal_L24e5d8bOB1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24ECOD (1.6)
Sribosomal_L24e5d8bS1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24ECOD (1.6)
BRibosomal_L3e5d8bB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
XARibosomal_L3e5d8bXA1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
PBRibosomal_L25pe5d8bPB1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
PBRibosomal_TL5_Ce5d8bPB2 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: Ribosomal_TL5_CECOD (1.6)
TRibosomal_L25pe5d8bT2 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
TRibosomal_TL5_Ce5d8bT1 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: Ribosomal_TL5_CECOD (1.6)
QBRibosomal_L27e5d8bQB1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
URibosomal_L27e5d8bU1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
RBRibosomal_L28e5d8bRB1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
VRibosomal_L28e5d8bV1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
SBRibosomal_L29e5d8bSB1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
WRibosomal_L29e5d8bW1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
TBRibosomal_L30e5d8bTB1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
XRibosomal_L30e5d8bX1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
UBRibosomal_L32pe5d8bUB1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
YRibosomal_L32pe5d8bY1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
VBRibosomal_L33e5d8bVB1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
ZRibosomal_L33e5d8bZ1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
AARibosomal_L34e5d8bAA1 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
WBRibosomal_L34e5d8bWB1 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
BARibosomal_L35pe5d8bBA1 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
XBRibosomal_L35pe5d8bXB1 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
CARibosomal_S2e5d8bCA1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
YBRibosomal_S2e5d8bYB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
CRibosomal_L4e5d8bC1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
YARibosomal_L4e5d8bYA1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
DARibosomal_S3_Ce5d8bDA2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
DAKH_2_1e5d8bDA1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
ZBRibosomal_S3_Ce5d8bZB2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
ZBKH_2_1e5d8bZB1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
ACS4e5d8bAC1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
EAS4e5d8bEA1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
BCRibosomal_S5_Ce5d8bBC2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
BCRibosomal_S5e5d8bBC1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
FARibosomal_S5_Ce5d8bFA1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
FARibosomal_S5e5d8bFA2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
CCRibosomal_S6e5d8bCC1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
GARibosomal_S6e5d8bGA1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
DCRibosomal_S7_1e5d8bDC1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
HARibosomal_S7_1e5d8bHA1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
ECRibosomal_S8_Ne5d8bEC1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
ECRibosomal_S8_Ce5d8bEC2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
IARibosomal_S8_Ne5d8bIA1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
IARibosomal_S8_Ce5d8bIA2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
FCRibosomal_S9e5d8bFC1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
JARibosomal_S9e5d8bJA1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
GCRibosomal_S10e5d8bGC1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
KARibosomal_S10e5d8bKA1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
HCRibosomal_S11e5d8bHC1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
LARibosomal_S11e5d8bLA1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
ICRibosom_S12_S23e5d8bIC1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
MARibosom_S12_S23e5d8bMA1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
DRibosomal_L5_Ce5d8bD1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
ZARibosomal_L5_Ce5d8bZA1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
JCRibosomal_S13_1e5d8bJC1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
NARibosomal_S13_1e5d8bNA1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
KCRibosomal_S14e5d8bKC1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
OARibosomal_S14e5d8bOA1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
LCRibosomal_S15_1e5d8bLC1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
PARibosomal_S15_1e5d8bPA1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
MCRibosomal_S16_1e5d8bMC1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
QARibosomal_S16_1e5d8bQA1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
NCRibosomal_S17_1e5d8bNC1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
RARibosomal_S17_1e5d8bRA1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
OCRibosomal_S18e5d8bOC1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
SARibosomal_S18e5d8bSA1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
PCRibosomal_S19e5d8bPC1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
TARibosomal_S19e5d8bTA1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
QCRibosomal_S20pe5d8bQC1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
UARibosomal_S20pe5d8bUA1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
SCRibosomal_L31e5d8bSC1 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
TCRibosomal_L31e5d8bTC1 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
ABRibosomal_L6e5d8bAB2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
ABRibosomal_L6_1e5d8bAB1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
ERibosomal_L6e5d8bE1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
ERibosomal_L6_1e5d8bE2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
BBRibosomal_L9_Ne5d8bBB2 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
BBRibosomal_L9_Ce5d8bBB1 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_CECOD (1.6)
FRibosomal_L9_Ne5d8bF2 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
FRibosomal_L9_Ce5d8bF1 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_CECOD (1.6)
CBRibosomal_L11e5d8bCB2 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
CBRibosomal_L11_Ne5d8bCB1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)
GRibosomal_L11e5d8bG1 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
GRibosomal_L11_Ne5d8bG2 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)
DBRibosomal_L13e5d8bDB1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
HRibosomal_L13e5d8bH1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
EBRibosomal_L14e5d8bEB1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
IRibosomal_L14e5d8bI1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, WA
PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
A, WA
PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
FB, J
PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
GB, K
PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
HB, L
PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
IB, M
PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
JB, N
PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
KB, O
PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
LB, P
PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
MB, Q
PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
NB, R
PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
OB, S
PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
OB, S
PF00467KOW motif (KOW)KOW motif- Family
B, XA
PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
PB, T
PF14693Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C)Ribosomal protein TL5, C-terminal domainThis family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC pr ...This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC proteins. TL5 or CTC are not found in Eukarya or Archaea. In some Bacteria, including E. coli, this ribosomal subunit occurs as a single domain protein (named Ribosomal subunit L25), where the only domain is homologous to TL5 N-terminal domain (hence included in family Pfam:PF01386). The function of the C-terminal domain of TLC is at present unknown.
Domain
PB, T
PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.Domain
QB, U
PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
RB, V
PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
SB, W
PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
TB, X
PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
UB, Y
PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
VB, Z
PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
C, YA
PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
PF07650KH domain (KH_2)KH domain- Domain
PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
D, ZA
PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
D, ZA
PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
PF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
PF1707030S ribosomal protein Thx (Thx)30S ribosomal protein Thx- Family
PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
AB, E
PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
BB, F
PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
BB, F
PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domain- Domain
CB, G
PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
CB, G
PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
DB, H
PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
EB, I
PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, WA
50S ribosomal protein L2
FB, J
50S ribosomal protein L15
GB, K
50S ribosomal protein L16
HB, L
50S ribosomal protein L17
IB, M
50S ribosomal protein L18
JB, N
50S ribosomal protein L19
KB, O
50S ribosomal protein L20
LB, P
50S ribosomal protein L21
MB, Q
50S ribosomal protein L22
NB, R
50S ribosomal protein L23
OB, S
50S ribosomal protein L24
B, XA
50S ribosomal protein L3
PB, T
50S ribosomal protein L25
QB, U
50S ribosomal protein L27
RB, V
50S ribosomal protein L28
SB, W
50S ribosomal protein L29
TB, X
50S ribosomal protein L30
UB, Y
50S ribosomal protein L32
VB, Z
50S ribosomal protein L33
50S ribosomal protein L34
50S ribosomal protein L35
30S ribosomal protein S2
C, YA
50S ribosomal protein L4
30S ribosomal protein S3
30S ribosomal protein S4
30S ribosomal protein S5
30S ribosomal protein S6
30S ribosomal protein S7
30S ribosomal protein S8
30S ribosomal protein S9
30S ribosomal protein S10
30S ribosomal protein S11
30S ribosomal protein S12
D, ZA
50S ribosomal protein L5
30S ribosomal protein S13
30S ribosomal protein S14
30S ribosomal protein S15
30S ribosomal protein S16
30S ribosomal protein S17
30S ribosomal protein S18
30S ribosomal protein S19
30S ribosomal protein S20
30S ribosomal protein Thx -
50S ribosomal protein L31
AB, E
50S ribosomal protein L6
16S ribosomal RNA---
23S ribosomal RNA---
5S ribosomal RNA---
BD,
CD [auth ED],
DD [auth FD],
XC
tRNA---
ED [auth GD],
FD [auth HD]
mRNA---
BB, F
50S ribosomal protein L9
CB, G
50S ribosomal protein L11
DB, H
50S ribosomal protein L13
EB, I
50S ribosomal protein L14

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, WA
IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
A, WA
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
A, WA
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
A, WA
IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
A, WA
IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
A, WA
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
A, WA
IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
A, WA
IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
A, WA
IPR002171Large ribosomal subunit protein uL2Family
FB, J
IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
FB, J
IPR021131Large ribosomal subunit protein uL15/eL18Domain
FB, J
IPR030878Large ribosomal subunit protein uL15Family
FB, J
IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
FB, J
IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
GB, K
IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
GB, K
IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
GB, K
IPR016180Large ribosomal subunit protein uL16 domainDomain
GB, K
IPR047873Large ribosomal subunit protein uL16Family
HB, L
IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
HB, L
IPR000456Large ribosomal subunit protein bL17Family
IB, M
IPR005484Large ribosomal subunit protein uL18Family
IB, M
IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
JB, N
IPR001857Large ribosomal subunit protein bL19Family
JB, N
IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
JB, N
IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
JB, N
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
KB, O
IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
KB, O
IPR005813Large ribosomal subunit protein bL20Family
LB, P
IPR028909Large ribosomal subunit protein bL21-likeFamily
LB, P
IPR001787Large ribosomal subunit protein bL21Family
LB, P
IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
MB, Q
IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
MB, Q
IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
MB, Q
IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
MB, Q
IPR001063Large ribosomal subunit protein uL22Family
MB, Q
IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
NB, R
IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
NB, R
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
NB, R
IPR013025Large ribosomal subunit protein uL23-likeFamily
OB, S
IPR003256Large ribosomal subunit protein uL24Family
OB, S
IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
OB, S
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
OB, S
IPR005824KOWDomain
OB, S
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
OB, S
IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
B, XA
IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
B, XA
IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
B, XA
IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
B, XA
IPR000597Large ribosomal subunit protein uL3Family
PB, T
IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
PB, T
IPR001021Ribosomal protein bL25, long-formFamily
PB, T
IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
PB, T
IPR037121Large ribosomal subunit protein bL25, C-terminalHomologous Superfamily
PB, T
IPR020057Large ribosomal subunit protein bL25, beta domainDomain
PB, T
IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
QB, U
IPR001684Large ribosomal subunit protein bL27Family
QB, U
IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
RB, V
IPR001383Large ribosomal subunit protein bL28, bacterial-typeFamily
RB, V
IPR026569Large ribosomal subunit protein bL28Family
RB, V
IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
SB, W
IPR001854Large ribosomal subunit protein uL29Family
SB, W
IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
SB, W
IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
TB, X
IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
TB, X
IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
TB, X
IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
TB, X
IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
UB, Y
IPR002677Large ribosomal subunit protein bL32Family
UB, Y
IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
UB, Y
IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
VB, Z
IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
VB, Z
IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
VB, Z
IPR001705Large ribosomal subunit protein bL33Family
VB, Z
IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
IPR000271Large ribosomal subunit protein bL34Family
IPR021137Large ribosomal subunit protein bL35-likeFamily
IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
IPR001706Large ribosomal subunit protein bL35Family
IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
IPR001865Small ribosomal subunit protein uS2Family
C, YA
IPR013005Large ribosomal subunit protein uL4-likeFamily
C, YA
IPR002136Large ribosomal subunit protein uL4Family
C, YA
IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
IPR004087K Homology domainDomain
IPR004044K Homology domain, type 2Domain
IPR015946K homology domain-like, alpha/betaHomologous Superfamily
IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
IPR002942RNA-binding S4 domainDomain
IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
IPR022801Small ribosomal subunit protein uS4Family
IPR000851Small ribosomal subunit protein uS5Family
IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
IPR000529Small ribosomal subunit protein bS6Family
IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
IPR000235Small ribosomal subunit protein uS7Family
IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
IPR023798Small ribosomal subunit protein uS7 domainDomain
IPR000630Small ribosomal subunit protein uS8Family
IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
IPR000754Small ribosomal subunit protein uS9Family
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
IPR001848Small ribosomal subunit protein uS10Family
IPR027486Small ribosomal subunit protein uS10 domainDomain
IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
IPR001971Small ribosomal subunit protein uS11Family
IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
IPR006032Small ribosomal subunit protein uS12Family
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR005679Ribosomal protein uS12, bacterial-typeFamily
D, ZA
IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
D, ZA
IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
D, ZA
IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
D, ZA
IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
D, ZA
IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
D, ZA
IPR002132Large ribosomal subunit protein uL5Family
IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
IPR001892Small ribosomal subunit protein uS13Family
IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
IPR023053Small ribosomal subunit protein uS14, bacteriaFamily
IPR001209Small ribosomal subunit protein uS14Family
IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
IPR000589Small ribosomal subunit protein uS15Family
IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
IPR000307Small ribosomal subunit protein bS16Family
IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR000266Small ribosomal subunit protein uS17Family
IPR001648Small ribosomal subunit protein bS18Family
IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
IPR002222Small ribosomal subunit protein uS19Family
IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
IPR002583Small ribosomal subunit protein bS20Family
IPR030826Small ribosomal subunit protein bTHX/bTHXc/bTHXmFamily
IPR031414Small ribosomal subunit protein bTHXFamily
IPR002150Large ribosomal subunit protein bL31 type A/BFamily
IPR027491Large ribosomal subunit protein bL31 type AFamily
IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
AB, E
IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
AB, E
IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
AB, E
IPR000702Large ribosomal subunit protein uL6-likeFamily
AB, E
IPR019906Large ribosomal subunit protein uL6, bacterial-typeFamily
BB, F
IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
BB, F
IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
BB, F
IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
BB, F
IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
BB, F
IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
BB, F
IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
BB, F
IPR000244Large ribosomal subunit protein bL9Family
CB, G
IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
CB, G
IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
CB, G
IPR000911Ribosomal protein uL11Family
CB, G
IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
CB, G
IPR006519Large ribosomal subunit protein uL11, bacterial-typeFamily
CB, G
IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
CB, G
IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
DB, H
IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
DB, H
IPR005822Large ribosomal subunit protein uL13Family
DB, H
IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
DB, H
IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
EB, I
IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
EB, I
IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
EB, I
IPR000218Large ribosomal subunit protein uL14Family
EB, I
IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site