5BMZ
Crystal Structure of Putative MarR Family Transcriptional Regulator HcaR from Acinetobacter sp. ADP complexed with 24mer DNA.
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF12802 | e5bmzA1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF12802 | ECOD (1.6) |
B | PF12802 | e5bmzB1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF12802 | ECOD (1.6) |
E [auth C] | PF12802 | e5bmzC1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF12802 | ECOD (1.6) |
F [auth D] | PF12802 | e5bmzD1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF12802 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
B | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
E [auth C] | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
F [auth D] | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B, E [auth C], F [auth D] | PF12802 | MarR family (MarR_2) | MarR family | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, B, E [auth C], F [auth D] | HcaR protein | - | - | |
C [auth E], D [auth F], G, H | DNA (5'-D(P*GP*AP*AP*TP*AP*TP*CP*AP*GP*TP*TP*AP*AP*AP*CP*TP*GP*AP*TP*AP*TP*TP*C)-3') | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B, E [auth C], F [auth D] | IPR000835 | MarR-type HTH domain | Domain |
A, B, E [auth C], F [auth D] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
A, B, E [auth C], F [auth D] | IPR039422 | Transcription regulators MarR/SlyA-like | Family |
A, B, E [auth C], F [auth D] | IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |