5AYR
The crystal structure of SAUGI/human UDG complex
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5ayra1 | Alpha and beta proteins (a/b) | Uracil-DNA glycosylase-like | Uracil-DNA glycosylase-like | Uracil-DNA glycosylase | Uracil-DNA glycosylase | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d5ayra3 | Artifacts | Tags | Tags | Tags | C-terminal Tags | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d5ayra2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C | d5ayrc1 | Alpha and beta proteins (a/b) | Uracil-DNA glycosylase-like | Uracil-DNA glycosylase-like | Uracil-DNA glycosylase | Uracil-DNA glycosylase | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C | d5ayrc3 | Artifacts | Tags | Tags | Tags | C-terminal Tags | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C | d5ayrc2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Uracil-DNA glycosylase-like | 8042482 | 3001106 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Uracil-DNA glycosylase-like | 8042482 | 3001106 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Uracil-DNA glycosylase inhibitor protein | 8054183 | 3000500 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Uracil-DNA glycosylase inhibitor protein | 8054183 | 3000500 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF03167 | e5ayrA1 | A: a/b three-layered sandwiches | X: Uracil-DNA glycosylase-like (From Topology) | H: Uracil-DNA glycosylase-like (From Topology) | T: Uracil-DNA glycosylase-like | F: PF03167 | ECOD (1.6) |
C | PF03167 | e5ayrC1 | A: a/b three-layered sandwiches | X: Uracil-DNA glycosylase-like (From Topology) | H: Uracil-DNA glycosylase-like (From Topology) | T: Uracil-DNA glycosylase-like | F: PF03167 | ECOD (1.6) |
B | PF06106 | e5ayrB1 | A: a+b two layers | X: Cystatin-like | H: Uracil-DNA glycosylase inhibitor protein (From Topology) | T: Uracil-DNA glycosylase inhibitor protein | F: PF06106 | ECOD (1.6) |
D | PF06106 | e5ayrD1 | A: a+b two layers | X: Cystatin-like | H: Uracil-DNA glycosylase inhibitor protein (From Topology) | T: Uracil-DNA glycosylase inhibitor protein | F: PF06106 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.470.10 | Alpha Beta | 3-Layer(aba) Sandwich | Uracil-DNA Glycosylase, subunit E | Uracil-DNA glycosylase-like domain | CATH (4.3.0) |
C | 3.40.470.10 | Alpha Beta | 3-Layer(aba) Sandwich | Uracil-DNA Glycosylase, subunit E | Uracil-DNA glycosylase-like domain | CATH (4.3.0) |
B | 3.10.450.250 | Alpha Beta | Roll | Nuclear Transport Factor 2 | Chain: A, | CATH (4.3.0) |
D | 3.10.450.250 | Alpha Beta | Roll | Nuclear Transport Factor 2 | Chain: A, | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03167 | Uracil DNA glycosylase superfamily (UDG) | Uracil DNA glycosylase superfamily | - | Domain | |
PF06106 | S. aureus uracil DNA glycosylase inhibitor (SAUGI) | S. aureus uracil DNA glycosylase inhibitor | Uracil-DNA glycosylase inhibitors, are DNA mimic proteins that prevent the DNA binding sites of UDGs (Uracil DNA glycosylase) from interacting with their DNA substrate. SSP0047 Swiss:Q4A134 (or SAUGI; for Staphylococcus aureus uracil-DNA glycosylase ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036895 | Uracil-DNA glycosylase-like domain superfamily | Homologous Superfamily | |
IPR002043 | Uracil-DNA glycosylase family 1 | Family | |
IPR018085 | Uracil-DNA glycosylase, active site | Active Site | |
IPR005122 | Uracil-DNA glycosylase-like | Domain | |
IPR043068 | Uracil DNA glycosylase inhibitor superfamily | Homologous Superfamily | |
IPR009295 | S. aureus uracil DNA glycosylase inhibitor | Family |