Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AMSMEG_5817e4zy7A1 A: a+b two layersX: Sterol carrier protein-likeH: Sterol carrier protein, SCP-related (From Topology)T: Sterol carrier protein, SCP-relatedF: MSMEG_5817ECOD (1.6)
BMSMEG_5817e4zy7B1 A: a+b two layersX: Sterol carrier protein-likeH: Sterol carrier protein, SCP-related (From Topology)T: Sterol carrier protein, SCP-relatedF: MSMEG_5817ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.1050.40 Alpha Beta 2-Layer Sandwich Nonspecific Lipid-transfer Protein Chain ACATH (4.3.0)
B3.30.1050.40 Alpha Beta 2-Layer Sandwich Nonspecific Lipid-transfer Protein Chain ACATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF17844Bacterial SCP ortholog (SCP_3)Bacterial SCP orthologThis domain is found in MSMEG_5817 gene product from M. smegmatis. It has been shown to be vital for mycobacterial survival within host macrophages. Crystal structure revealed a Rossmann-like fold alpha/beta two-layer sandwich forming a highly hydrop ...This domain is found in MSMEG_5817 gene product from M. smegmatis. It has been shown to be vital for mycobacterial survival within host macrophages. Crystal structure revealed a Rossmann-like fold alpha/beta two-layer sandwich forming a highly hydrophobic interface cavity and with high structural homology to the SCP family. Hence, it has been suggested that this domain may be involved in the interaction of apolar ligands through its hydrophobic cavity. Alanine-scanning mutagenesis of the hydrophobic cavity of MSMEG_5817 protein demonstrated that the conserved Val82 residue plays an important role in ligand binding [1].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR041629Bacterial SCP orthologueDomain