4V9L
70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
G [auth AH] | SCOP2B Superfamily | Ribosomal protein S8 | 8098860 | 3000709 | SCOP2B (2022-06-29) |
PB [auth CH] | SCOP2B Superfamily | Ribosomal protein S8 | 8098860 | 3000709 | SCOP2B (2022-06-29) |
K [auth AL] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8098824 | 3000135 | SCOP2B (2022-06-29) |
TB [auth CL] | SCOP2 Family | Cold shock DNA-binding domain-like | 8098823 | 4001909 | SCOP2 (2022-06-29) |
TB [auth CL] | SCOP2 Superfamily | Nucleic acid-binding proteins | 8098824 | 3000135 | SCOP2 (2022-06-29) |
BC [auth CT] | SCOP2B Superfamily | Ribosomal protein S20 | 8101559 | 3001362 | SCOP2B (2022-06-29) |
S [auth AT] | SCOP2B Superfamily | Ribosomal protein S20 | 8101559 | 3001362 | SCOP2B (2022-06-29) |
A [auth AB] | SCOP2B Superfamily | SIS domain/Ribosomal protein S2-like | 8063836 | 3001397 | SCOP2B (2022-06-29) |
JB [auth CB] | SCOP2B Superfamily | SIS domain/Ribosomal protein S2-like | 8063836 | 3001397 | SCOP2B (2022-06-29) |
J [auth AK] | SCOP2B Superfamily | Translational machinery components | 8098852 | 3000571 | SCOP2B (2022-06-29) |
SB [auth CK] | SCOP2B Superfamily | Translational machinery components | 8098852 | 3000571 | SCOP2B (2022-06-29) |
L [auth AM] | SCOP2B Superfamily | S13-like H2TH domain | 8098854 | 3000053 | SCOP2B (2022-06-29) |
UB [auth CM] | SCOP2B Superfamily | S13-like H2TH domain | 8098854 | 3000053 | SCOP2B (2022-06-29) |
M [auth AN] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8052583 | 3000068 | SCOP2B (2022-06-29) |
VB [auth CN] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8052583 | 3000068 | SCOP2B (2022-06-29) |
AC [auth CS] | SCOP2B Superfamily | Ribosomal protein S19 | 8098856 | 3000686 | SCOP2B (2022-06-29) |
R [auth AS] | SCOP2B Superfamily | Ribosomal protein S19 | 8098856 | 3000686 | SCOP2B (2022-06-29) |
HC [auth DC] | SCOP2B Superfamily | Ribosomal protein L1p/L10e-like | 8099890 | 3001911 | SCOP2B (2022-06-29) |
Y [auth BC] | SCOP2B Superfamily | Ribosomal protein L1p/L10e-like | 8099890 | 3001911 | SCOP2B (2022-06-29) |
AA [auth BE] | SCOP2B Superfamily | Translational proteins | 8089140 | 3000811 | SCOP2B (2022-06-29) |
JC [auth DE] | SCOP2B Superfamily | Translational proteins | 8089140 | 3000811 | SCOP2B (2022-06-29) |
C [auth AD] | SCOP2B Superfamily | Alpha-L RNA-binding motif | 8093624 | 3001473 | SCOP2B (2022-06-29) |
LB [auth CD] | SCOP2B Superfamily | Alpha-L RNA-binding motif | 8093624 | 3001473 | SCOP2B (2022-06-29) |
GA [auth BN] | SCOP2B Superfamily | Ribosomal protein L13 | 8099906 | 3001134 | SCOP2B (2022-06-29) |
PC [auth DN] | SCOP2B Superfamily | Ribosomal protein L13 | 8099906 | 3001134 | SCOP2B (2022-06-29) |
HA [auth BO] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8093738 | 3000433 | SCOP2B (2022-06-29) |
QC [auth DO] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8093738 | 3000433 | SCOP2B (2022-06-29) |
IA [auth BP] | SCOP2B Superfamily | Ribosomal proteins L15p and L18e | 8099902 | 3001045 | SCOP2B (2022-06-29) |
RC [auth DP] | SCOP2B Superfamily | Ribosomal proteins L15p and L18e | 8099902 | 3001045 | SCOP2B (2022-06-29) |
LA [auth BS] | SCOP2B Superfamily | Translational machinery components | 8074014 | 3000571 | SCOP2B (2022-06-29) |
UC [auth DS] | SCOP2B Superfamily | Translational machinery components | 8074014 | 3000571 | SCOP2B (2022-06-29) |
NA [auth BU] | SCOP2B Superfamily | Ribosomal protein L20 | 8093660 | 3000563 | SCOP2B (2022-06-29) |
WC [auth DU] | SCOP2B Superfamily | Ribosomal protein L20 | 8093660 | 3000563 | SCOP2B (2022-06-29) |
OA [auth BV] | SCOP2B Superfamily | l21p-like | 8093656 | 3002005 | SCOP2B (2022-06-29) |
XC [auth DV] | SCOP2B Superfamily | l21p-like | 8093656 | 3002005 | SCOP2B (2022-06-29) |
PA [auth BW] | SCOP2B Superfamily | Ribosomal protein L22 | 8099898 | 3001078 | SCOP2B (2022-06-29) |
YC [auth DW] | SCOP2B Superfamily | Ribosomal protein L22 | 8099898 | 3001078 | SCOP2B (2022-06-29) |
QA [auth BX] | SCOP2B Superfamily | Ribosomal proteins S24e L23 and L15e | 8099896 | 3000210 | SCOP2B (2022-06-29) |
ZC [auth DX] | SCOP2B Superfamily | Ribosomal proteins S24e L23 and L15e | 8099896 | 3000210 | SCOP2B (2022-06-29) |
DD [auth D2] | SCOP2B Superfamily | Ribosomal protein L29 (L29p) | 8076744 | 3000713 | SCOP2B (2022-06-29) |
UA [auth B2] | SCOP2B Superfamily | Ribosomal protein L29 (L29p) | 8076744 | 3000713 | SCOP2B (2022-06-29) |
ED [auth D3] | SCOP2B Superfamily | Ribosomal protein L30p/L7e | 8099900 | 3001378 | SCOP2B (2022-06-29) |
VA [auth B3] | SCOP2B Superfamily | Ribosomal protein L30p/L7e | 8099900 | 3001378 | SCOP2B (2022-06-29) |
FD [auth D5] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8081579 | 3001320 | SCOP2B (2022-06-29) |
WA [auth B5] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8081579 | 3001320 | SCOP2B (2022-06-29) |
E [auth AF] | SCOP2B Superfamily | Ribosomal protein S6 | 8098858 | 3001323 | SCOP2B (2022-06-29) |
NB [auth CF] | SCOP2B Superfamily | Ribosomal protein S6 | 8098858 | 3001323 | SCOP2B (2022-06-29) |
GD [auth D6] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8099892 | 3001320 | SCOP2B (2022-06-29) |
XA [auth B6] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8099892 | 3001320 | SCOP2B (2022-06-29) |
ID [auth D8] | SCOP2B Superfamily | L35p-like | 8099912 | 3000790 | SCOP2B (2022-06-29) |
ZA [auth B8] | SCOP2B Superfamily | L35p-like | 8099912 | 3000790 | SCOP2B (2022-06-29) |
AB [auth B9] | SCOP2B Superfamily | Ribosomal protein L36 | 8093658 | 3001346 | SCOP2B (2022-06-29) |
JD [auth D9] | SCOP2B Superfamily | Ribosomal protein L36 | 8093658 | 3001346 | SCOP2B (2022-06-29) |
BB [auth Be] | SCOP2B Superfamily | ClpS-like | 8099888 | 3000936 | SCOP2B (2022-06-29) |
KD [auth De] | SCOP2B Superfamily | ClpS-like | 8099888 | 3000936 | SCOP2B (2022-06-29) |
F [auth AG] | SCOP2B Superfamily | Ribosomal protein S7 | 8093626 | 3000799 | SCOP2B (2022-06-29) |
OB [auth CG] | SCOP2B Superfamily | Ribosomal protein S7 | 8093626 | 3000799 | SCOP2B (2022-06-29) |
H [auth AI] | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8093728 | 3000100 | SCOP2B (2022-06-29) |
QB [auth CI] | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8093728 | 3000100 | SCOP2B (2022-06-29) |
I [auth AJ] | SCOP2B Superfamily | Ribosomal protein S10 | 8098850 | 3001336 | SCOP2B (2022-06-29) |
RB [auth CJ] | SCOP2B Superfamily | Ribosomal protein S10 | 8098850 | 3001336 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
G [auth AH] | PF00410 | e4v9lAH1 | A: a+b two layers | X: R3H domain-like | H: Ribosomal protein S8, N-terminal domain (From Topology) | T: Ribosomal protein S8, N-terminal domain | F: PF00410 | ECOD (1.6) |
G [auth AH] | PF00410 | e4v9lAH2 | A: a+b two layers | X: Ribosomal protein S8, C-terminal domain (From Topology) | H: Ribosomal protein S8, C-terminal domain (From Topology) | T: Ribosomal protein S8, C-terminal domain | F: PF00410 | ECOD (1.6) |
PB [auth CH] | PF00410 | e4v9lCH1 | A: a+b two layers | X: R3H domain-like | H: Ribosomal protein S8, N-terminal domain (From Topology) | T: Ribosomal protein S8, N-terminal domain | F: PF00410 | ECOD (1.6) |
PB [auth CH] | PF00410 | e4v9lCH2 | A: a+b two layers | X: Ribosomal protein S8, C-terminal domain (From Topology) | H: Ribosomal protein S8, C-terminal domain (From Topology) | T: Ribosomal protein S8, C-terminal domain | F: PF00410 | ECOD (1.6) |
K [auth AL] | PF00164 | e4v9lAL1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF00164 | ECOD (1.6) |
TB [auth CL] | PF00164 | e4v9lCL1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF00164 | ECOD (1.6) |
BC [auth CT] | PF01649 | e4v9lCT1 | A: alpha bundles | X: Spectrin repeat-like | H: Ribosomal protein S20 (From Topology) | T: Ribosomal protein S20 | F: PF01649 | ECOD (1.6) |
S [auth AT] | PF01649 | e4v9lAT1 | A: alpha bundles | X: Spectrin repeat-like | H: Ribosomal protein S20 (From Topology) | T: Ribosomal protein S20 | F: PF01649 | ECOD (1.6) |
CD [auth D0] | PF01016 | e4v9lD01 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Ribosomal L27 protein | F: PF01016 | ECOD (1.6) |
TA [auth B0] | PF01016 | e4v9lB01 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Ribosomal L27 protein | F: PF01016 | ECOD (1.6) |
A [auth AB] | PF00318 | e4v9lAB1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Ribosomal protein S2/SIS domain (From Topology) | T: Ribosomal protein S2/SIS domain | F: PF00318 | ECOD (1.6) |
JB [auth CB] | PF00318 | e4v9lCB1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Ribosomal protein S2/SIS domain (From Topology) | T: Ribosomal protein S2/SIS domain | F: PF00318 | ECOD (1.6) |
J [auth AK] | PF00411 | e4v9lAK1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00411 | ECOD (1.6) |
SB [auth CK] | PF00411 | e4v9lCK1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00411 | ECOD (1.6) |
L [auth AM] | PF00416 | e4v9lAM1 | A: alpha arrays | X: HhH/H2TH | H: H2TH (From Topology) | T: H2TH | F: PF00416 | ECOD (1.6) |
UB [auth CM] | PF00416 | e4v9lCM1 | A: alpha arrays | X: HhH/H2TH | H: H2TH (From Topology) | T: H2TH | F: PF00416 | ECOD (1.6) |
M [auth AN] | PF00253 | e4v9lAN1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: PF00253 | ECOD (1.6) |
VB [auth CN] | PF00253 | e4v9lCN1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: PF00253 | ECOD (1.6) |
N [auth AO] | PF00312 | e4v9lAO1 | A: alpha arrays | X: S15/NS1 RNA-binding domain (From Topology) | H: S15/NS1 RNA-binding domain (From Topology) | T: S15/NS1 RNA-binding domain | F: PF00312 | ECOD (1.6) |
WB [auth CO] | PF00312 | e4v9lCO1 | A: alpha arrays | X: S15/NS1 RNA-binding domain (From Topology) | H: S15/NS1 RNA-binding domain (From Topology) | T: S15/NS1 RNA-binding domain | F: PF00312 | ECOD (1.6) |
O [auth AP] | PF00886 | e4v9lAP1 | A: a+b two layers | X: Ribosomal protein S16 (From Topology) | H: Ribosomal protein S16 (From Topology) | T: Ribosomal protein S16 | F: PF00886 | ECOD (1.6) |
XB [auth CP] | PF00886 | e4v9lCP1 | A: a+b two layers | X: Ribosomal protein S16 (From Topology) | H: Ribosomal protein S16 (From Topology) | T: Ribosomal protein S16 | F: PF00886 | ECOD (1.6) |
P [auth AQ] | PF00366 | e4v9lAQ1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF00366 | ECOD (1.6) |
YB [auth CQ] | PF00366 | e4v9lCQ1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF00366 | ECOD (1.6) |
Q [auth AR] | PF01084 | e4v9lAR1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF01084 | ECOD (1.6) |
ZB [auth CR] | PF01084 | e4v9lCR1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF01084 | ECOD (1.6) |
AC [auth CS] | PF00203 | e4v9lCS1 | A: a+b two layers | X: Ribosomal protein S19 (From Topology) | H: Ribosomal protein S19 (From Topology) | T: Ribosomal protein S19 | F: PF00203 | ECOD (1.6) |
R [auth AS] | PF00203 | e4v9lAS1 | A: a+b two layers | X: Ribosomal protein S19 (From Topology) | H: Ribosomal protein S19 (From Topology) | T: Ribosomal protein S19 | F: PF00203 | ECOD (1.6) |
B [auth AC] | PF00189 | e4v9lAC1 | A: a+b two layers | X: T-fold | H: Ribosomal protein S3-C (From Topology) | T: Ribosomal protein S3-C | F: PF00189 | ECOD (1.6) |
B [auth AC] | PF07650 | e4v9lAC2 | A: a+b two layers | X: Alpha-lytic protease prodomain-like | H: KH-domains | T: Prokaryotic type KH domain (KH-domain type II) | F: PF07650 | ECOD (1.6) |
KB [auth CC] | PF00189 | e4v9lCC1 | A: a+b two layers | X: T-fold | H: Ribosomal protein S3-C (From Topology) | T: Ribosomal protein S3-C | F: PF00189 | ECOD (1.6) |
KB [auth CC] | PF07650 | e4v9lCC2 | A: a+b two layers | X: Alpha-lytic protease prodomain-like | H: KH-domains | T: Prokaryotic type KH domain (KH-domain type II) | F: PF07650 | ECOD (1.6) |
FC [auth CY] | PF03144 | e4v9lCY5 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: PF03144 | ECOD (1.6) |
FC [auth CY] | PF03764 | e4v9lCY4 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: PF03764 | ECOD (1.6) |
FC [auth CY] | PF00679 | e4v9lCY2 | A: a+b two layers | X: Alpha-beta plaits | H: EF-G C-terminal domain-like (From Topology) | T: EF-G C-terminal domain-like | F: PF00679 | ECOD (1.6) |
FC [auth CY] | PF14492 | e4v9lCY1 | A: a+b two layers | X: Alpha-beta plaits | H: EF-G C-terminal domain-like (From Topology) | T: EF-G C-terminal domain-like | F: PF14492 | ECOD (1.6) |
FC [auth CY] | PF00009 | e4v9lCY3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00009 | ECOD (1.6) |
W [auth AY] | PF03144 | e4v9lAY5 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: PF03144 | ECOD (1.6) |
W [auth AY] | PF03764 | e4v9lAY4 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: PF03764 | ECOD (1.6) |
W [auth AY] | PF00679 | e4v9lAY2 | A: a+b two layers | X: Alpha-beta plaits | H: EF-G C-terminal domain-like (From Topology) | T: EF-G C-terminal domain-like | F: PF00679 | ECOD (1.6) |
W [auth AY] | PF14492 | e4v9lAY1 | A: a+b two layers | X: Alpha-beta plaits | H: EF-G C-terminal domain-like (From Topology) | T: EF-G C-terminal domain-like | F: PF14492 | ECOD (1.6) |
W [auth AY] | PF00009 | e4v9lAY3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00009 | ECOD (1.6) |
HC [auth DC] | PF00687 | e4v9lDC1 | A: a+b two layers | X: a+b domain in Ribosomal protein L1 (From Topology) | H: a+b domain in Ribosomal protein L1 (From Topology) | T: a+b domain in Ribosomal protein L1 | F: PF00687 | ECOD (1.6) |
HC [auth DC] | PF00687 | e4v9lDC2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Rossmann-like domain in Ribosomal protein L1 (From Topology) | T: Rossmann-like domain in Ribosomal protein L1 | F: PF00687 | ECOD (1.6) |
Y [auth BC] | PF00687 | e4v9lBC1 | A: a+b two layers | X: a+b domain in Ribosomal protein L1 (From Topology) | H: a+b domain in Ribosomal protein L1 (From Topology) | T: a+b domain in Ribosomal protein L1 | F: PF00687 | ECOD (1.6) |
Y [auth BC] | PF00687 | e4v9lBC2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Rossmann-like domain in Ribosomal protein L1 (From Topology) | T: Rossmann-like domain in Ribosomal protein L1 | F: PF00687 | ECOD (1.6) |
IC [auth DD] | PF00181 | e4v9lDD2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF00181 | ECOD (1.6) |
IC [auth DD] | PF03947 | e4v9lDD1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF03947 | ECOD (1.6) |
Z [auth BD] | PF00181 | e4v9lBD2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF00181 | ECOD (1.6) |
Z [auth BD] | PF03947 | e4v9lBD1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF03947 | ECOD (1.6) |
AA [auth BE] | PF00297 | e4v9lBE1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: PF00297 | ECOD (1.6) |
JC [auth DE] | PF00297 | e4v9lDE1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: PF00297 | ECOD (1.6) |
BA [auth BF] | PF00573 | e4v9lBF1 | A: a/b three-layered sandwiches | X: Ribosomal protein L4 (From Topology) | H: Ribosomal protein L4 (From Topology) | T: Ribosomal protein L4 | F: PF00573 | ECOD (1.6) |
KC [auth DF] | PF00573 | e4v9lDF1 | A: a/b three-layered sandwiches | X: Ribosomal protein L4 (From Topology) | H: Ribosomal protein L4 (From Topology) | T: Ribosomal protein L4 | F: PF00573 | ECOD (1.6) |
CA [auth BG] | PF00281,PF00673 | e4v9lBG1 | A: a+b two layers | X: Ribosomal protein L5 (From Topology) | H: Ribosomal protein L5 (From Topology) | T: Ribosomal protein L5 | F: PF00281,PF00673 | ECOD (1.6) |
LC [auth DG] | PF00281,PF00673 | e4v9lDG1 | A: a+b two layers | X: Ribosomal protein L5 (From Topology) | H: Ribosomal protein L5 (From Topology) | T: Ribosomal protein L5 | F: PF00281,PF00673 | ECOD (1.6) |
C [auth AD] | PF00163,PF01479 | e4v9lAD1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Alpha-L RNA-binding motif | F: PF00163,PF01479 | ECOD (1.6) |
LB [auth CD] | PF00163,PF01479 | e4v9lCD1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Alpha-L RNA-binding motif | F: PF00163,PF01479 | ECOD (1.6) |
DA [auth BH] | PF00347 | e4v9lBH2 | A: a+b two layers | X: Ribosomal protein L6 (From Topology) | H: Ribosomal protein L6 (From Topology) | T: Ribosomal protein L6 | F: PF00347 | ECOD (1.6) |
MC [auth DH] | PF00347 | e4v9lDH2 | A: a+b two layers | X: Ribosomal protein L6 (From Topology) | H: Ribosomal protein L6 (From Topology) | T: Ribosomal protein L6 | F: PF00347 | ECOD (1.6) |
FA [auth BK] | PF00298 | e4v9lBK2 | A: alpha arrays | X: HTH | H: HTH | T: Ribosomal protein L11, C-terminal domain | F: PF00298 | ECOD (1.6) |
FA [auth BK] | PF03946 | e4v9lBK1 | A: a+b two layers | X: Ribosomal protein L11/L12e N-terminal domain-like | H: Ribosomal protein L11/L12e N-terminal domain (From Topology) | T: Ribosomal protein L11/L12e N-terminal domain | F: PF03946 | ECOD (1.6) |
OC [auth DK] | PF00298 | e4v9lDK2 | A: alpha arrays | X: HTH | H: HTH | T: Ribosomal protein L11, C-terminal domain | F: PF00298 | ECOD (1.6) |
OC [auth DK] | PF03946 | e4v9lDK1 | A: a+b two layers | X: Ribosomal protein L11/L12e N-terminal domain-like | H: Ribosomal protein L11/L12e N-terminal domain (From Topology) | T: Ribosomal protein L11/L12e N-terminal domain | F: PF03946 | ECOD (1.6) |
GA [auth BN] | PF00572 | e4v9lBN1 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal protein L13 and L16-A (From Topology) | T: Ribosomal protein L13 and L16-A | F: PF00572 | ECOD (1.6) |
PC [auth DN] | PF00572 | e4v9lDN1 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal protein L13 and L16-A (From Topology) | T: Ribosomal protein L13 and L16-A | F: PF00572 | ECOD (1.6) |
HA [auth BO] | PF00238 | e4v9lBO1 | A: beta barrels | X: Ribosomal protein L14-like | H: Ribosomal protein L14-related (From Topology) | T: Ribosomal protein L14-related | F: PF00238 | ECOD (1.6) |
QC [auth DO] | PF00238 | e4v9lDO1 | A: beta barrels | X: Ribosomal protein L14-like | H: Ribosomal protein L14-related (From Topology) | T: Ribosomal protein L14-related | F: PF00238 | ECOD (1.6) |
IA [auth BP] | PF00828 | e4v9lBP1 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal proteins L15p and L18e (From Topology) | T: Ribosomal proteins L15p and L18e | F: PF00828 | ECOD (1.6) |
RC [auth DP] | PF00828 | e4v9lDP1 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal proteins L15p and L18e (From Topology) | T: Ribosomal proteins L15p and L18e | F: PF00828 | ECOD (1.6) |
JA [auth BQ] | PF00252 | e4v9lBQ1 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Ribosomal protein L10e | F: PF00252 | ECOD (1.6) |
SC [auth DQ] | PF00252 | e4v9lDQ1 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Ribosomal protein L10e | F: PF00252 | ECOD (1.6) |
KA [auth BR] | PF01196 | e4v9lBR1 | A: a+b two layers | X: Enolase-N/ribosomal protein | H: Prokaryotic ribosomal protein L17 (From Topology) | T: Prokaryotic ribosomal protein L17 | F: PF01196 | ECOD (1.6) |
TC [auth DR] | PF01196 | e4v9lDR1 | A: a+b two layers | X: Enolase-N/ribosomal protein | H: Prokaryotic ribosomal protein L17 (From Topology) | T: Prokaryotic ribosomal protein L17 | F: PF01196 | ECOD (1.6) |
LA [auth BS] | PF00861 | e4v9lBS1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00861 | ECOD (1.6) |
UC [auth DS] | PF00861 | e4v9lDS1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00861 | ECOD (1.6) |
MA [auth BT] | PF01245 | e4v9lBT1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF01245 | ECOD (1.6) |
VC [auth DT] | PF01245 | e4v9lDT1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF01245 | ECOD (1.6) |
D [auth AE] | PF03719 | e4v9lAE2 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: PF03719 | ECOD (1.6) |
D [auth AE] | PF00333 | e4v9lAE1 | A: a+b two layers | X: dsRBD-like | H: dsRNA-binding domain-like (From Topology) | T: dsRNA-binding domain-like | F: PF00333 | ECOD (1.6) |
MB [auth CE] | PF03719 | e4v9lCE2 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: PF03719 | ECOD (1.6) |
MB [auth CE] | PF00333 | e4v9lCE1 | A: a+b two layers | X: dsRBD-like | H: dsRNA-binding domain-like (From Topology) | T: dsRNA-binding domain-like | F: PF00333 | ECOD (1.6) |
NA [auth BU] | PF00453 | e4v9lBU1 | A: alpha arrays | X: PABP domain-like | H: Ribosomal protein L20 (From Topology) | T: Ribosomal protein L20 | F: PF00453 | ECOD (1.6) |
WC [auth DU] | PF00453 | e4v9lDU1 | A: alpha arrays | X: PABP domain-like | H: Ribosomal protein L20 (From Topology) | T: Ribosomal protein L20 | F: PF00453 | ECOD (1.6) |
OA [auth BV] | PF00829 | e4v9lBV1 | A: beta barrels | X: Ribosomal protein L21p (From Topology) | H: Ribosomal protein L21p (From Topology) | T: Ribosomal protein L21p | F: PF00829 | ECOD (1.6) |
XC [auth DV] | PF00829 | e4v9lDV1 | A: beta barrels | X: Ribosomal protein L21p (From Topology) | H: Ribosomal protein L21p (From Topology) | T: Ribosomal protein L21p | F: PF00829 | ECOD (1.6) |
PA [auth BW] | PF00237 | e4v9lBW1 | A: a+b two layers | X: Enolase-N/ribosomal protein | H: Ribosomal protein L22 (From Topology) | T: Ribosomal protein L22 | F: PF00237 | ECOD (1.6) |
YC [auth DW] | PF00237 | e4v9lDW1 | A: a+b two layers | X: Enolase-N/ribosomal protein | H: Ribosomal protein L22 (From Topology) | T: Ribosomal protein L22 | F: PF00237 | ECOD (1.6) |
QA [auth BX] | PF00276 | e4v9lBX1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal proteins S24e, L23 and L15e (From Topology) | T: Ribosomal proteins S24e, L23 and L15e | F: PF00276 | ECOD (1.6) |
ZC [auth DX] | PF00276 | e4v9lDX1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal proteins S24e, L23 and L15e (From Topology) | T: Ribosomal proteins S24e, L23 and L15e | F: PF00276 | ECOD (1.6) |
AD [auth DY] | PF00467,PF17136 | e4v9lDY1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF00467,PF17136 | ECOD (1.6) |
RA [auth BY] | PF00467,PF17136 | e4v9lBY1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF00467,PF17136 | ECOD (1.6) |
BD [auth DZ] | PF01386 | e4v9lDZ2 | A: beta barrels | X: Ribosomal protein L25-like | H: Ribosomal protein L25-like (From Topology) | T: Ribosomal protein L25-like | F: PF01386 | ECOD (1.6) |
BD [auth DZ] | PF14693 | e4v9lDZ1 | A: a+b complex topology | X: Ribosomal protein TL5/L25 C-terminal domain-like | H: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology) | T: Ribosomal protein TL5/L25 C-terminal domain-related | F: PF14693 | ECOD (1.6) |
SA [auth BZ] | PF01386 | e4v9lBZ2 | A: beta barrels | X: Ribosomal protein L25-like | H: Ribosomal protein L25-like (From Topology) | T: Ribosomal protein L25-like | F: PF01386 | ECOD (1.6) |
SA [auth BZ] | PF14693 | e4v9lBZ1 | A: a+b complex topology | X: Ribosomal protein TL5/L25 C-terminal domain-like | H: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology) | T: Ribosomal protein TL5/L25 C-terminal domain-related | F: PF14693 | ECOD (1.6) |
DD [auth D2] | PF00831 | e4v9lD21 | A: alpha bundles | X: Long alpha-hairpin | H: Ribosomal protein L29 (L29p) (From Topology) | T: Ribosomal protein L29 (L29p) | F: PF00831 | ECOD (1.6) |
UA [auth B2] | PF00831 | e4v9lB21 | A: alpha bundles | X: Long alpha-hairpin | H: Ribosomal protein L29 (L29p) (From Topology) | T: Ribosomal protein L29 (L29p) | F: PF00831 | ECOD (1.6) |
ED [auth D3] | PF00327 | e4v9lD31 | A: a+b two layers | X: Ribosomal protein L30p/L7e (From Topology) | H: Ribosomal protein L30p/L7e (From Topology) | T: Ribosomal protein L30p/L7e | F: PF00327 | ECOD (1.6) |
VA [auth B3] | PF00327 | e4v9lB31 | A: a+b two layers | X: Ribosomal protein L30p/L7e (From Topology) | H: Ribosomal protein L30p/L7e (From Topology) | T: Ribosomal protein L30p/L7e | F: PF00327 | ECOD (1.6) |
FD [auth D5] | PF01783 | e4v9lD51 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: PF01783 | ECOD (1.6) |
WA [auth B5] | PF01783 | e4v9lB51 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: PF01783 | ECOD (1.6) |
E [auth AF] | PF01250 | e4v9lAF1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein S6 (From Topology) | T: Ribosomal protein S6 | F: PF01250 | ECOD (1.6) |
NB [auth CF] | PF01250 | e4v9lCF1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein S6 (From Topology) | T: Ribosomal protein S6 | F: PF01250 | ECOD (1.6) |
GD [auth D6] | PF00471 | e4v9lD61 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: PF00471 | ECOD (1.6) |
XA [auth B6] | PF00471 | e4v9lB61 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: PF00471 | ECOD (1.6) |
HD [auth D7] | PF00468 | e4v9lD71 | A: extended segments | X: 50S ribosomal protein L34 (From Topology) | H: 50S ribosomal protein L34 (From Topology) | T: 50S ribosomal protein L34 | F: PF00468 | ECOD (1.6) |
YA [auth B7] | PF00468 | e4v9lB71 | A: extended segments | X: 50S ribosomal protein L34 (From Topology) | H: 50S ribosomal protein L34 (From Topology) | T: 50S ribosomal protein L34 | F: PF00468 | ECOD (1.6) |
ID [auth D8] | PF01632 | e4v9lD81 | A: a+b two layers | X: Ribosomal protein L35p (From Topology) | H: Ribosomal protein L35p (From Topology) | T: Ribosomal protein L35p | F: PF01632 | ECOD (1.6) |
ZA [auth B8] | PF01632 | e4v9lB81 | A: a+b two layers | X: Ribosomal protein L35p (From Topology) | H: Ribosomal protein L35p (From Topology) | T: Ribosomal protein L35p | F: PF01632 | ECOD (1.6) |
AB [auth B9] | PF00444 | e4v9lB91 | A: few secondary structure elements | X: Ribosomal protein L36 (From Topology) | H: Ribosomal protein L36 (From Topology) | T: Ribosomal protein L36 | F: PF00444 | ECOD (1.6) |
JD [auth D9] | PF00444 | e4v9lD91 | A: few secondary structure elements | X: Ribosomal protein L36 (From Topology) | H: Ribosomal protein L36 (From Topology) | T: Ribosomal protein L36 | F: PF00444 | ECOD (1.6) |
BB [auth Be] | PF00542 | e4v9lBe1 | A: a+b two layers | X: ClpS-like | H: ClpS-related (From Topology) | T: ClpS-related | F: PF00542 | ECOD (1.6) |
KD [auth De] | PF00542 | e4v9lDe1 | A: a+b two layers | X: ClpS-like | H: ClpS-related (From Topology) | T: ClpS-related | F: PF00542 | ECOD (1.6) |
FB [auth B1] | PF00830 | e4v9lB11 | A: few secondary structure elements | X: Ribosomal protein bL28-related (From Homology) | H: Ribosomal protein bL28-related | T: Ribosomal protein L28 | F: PF00830 | ECOD (1.6) |
OD [auth D1] | PF00830 | e4v9lD11 | A: few secondary structure elements | X: Ribosomal protein bL28-related (From Homology) | H: Ribosomal protein bL28-related | T: Ribosomal protein L28 | F: PF00830 | ECOD (1.6) |
GB [auth B4] | PF01197 | e4v9lB41 | A: few secondary structure elements | X: Ribosomal protein L31p (From Topology) | H: Ribosomal protein L31p (From Topology) | T: Ribosomal protein L31p | F: PF01197 | ECOD (1.6) |
PD [auth D4] | PF01197 | e4v9lD41 | A: few secondary structure elements | X: Ribosomal protein L31p (From Topology) | H: Ribosomal protein L31p (From Topology) | T: Ribosomal protein L31p | F: PF01197 | ECOD (1.6) |
F [auth AG] | PF00177 | e4v9lAG1 | A: alpha arrays | X: Ribosomal protein S7 (From Topology) | H: Ribosomal protein S7 (From Topology) | T: Ribosomal protein S7 | F: PF00177 | ECOD (1.6) |
OB [auth CG] | PF00177 | e4v9lCG1 | A: alpha arrays | X: Ribosomal protein S7 (From Topology) | H: Ribosomal protein S7 (From Topology) | T: Ribosomal protein S7 | F: PF00177 | ECOD (1.6) |
H [auth AI] | PF00380 | e4v9lAI1 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: PF00380 | ECOD (1.6) |
QB [auth CI] | PF00380 | e4v9lCI1 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: PF00380 | ECOD (1.6) |
I [auth AJ] | PF00338 | e4v9lAJ1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein S10 (From Topology) | T: Ribosomal protein S10 | F: PF00338 | ECOD (1.6) |
RB [auth CJ] | PF00338 | e4v9lCJ1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein S10 (From Topology) | T: Ribosomal protein S10 | F: PF00338 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
G [auth AH], PB [auth CH] | PF00410 | Ribosomal protein S8 (Ribosomal_S8) | Ribosomal protein S8 | - | Domain |
K [auth AL], TB [auth CL] | PF00164 | Ribosomal protein S12/S23 (Ribosom_S12_S23) | Ribosomal protein S12/S23 | - | Family |
BC [auth CT], S [auth AT] | PF01649 | Ribosomal protein S20 (Ribosomal_S20p) | Ribosomal protein S20 | - | Family |
CD [auth D0], TA [auth B0] | PF01016 | Ribosomal L27 protein (Ribosomal_L27) | Ribosomal L27 protein | - | Family |
A [auth AB], JB [auth CB] | PF00318 | Ribosomal protein S2 (Ribosomal_S2) | Ribosomal protein S2 | - | Family |
J [auth AK], SB [auth CK] | PF00411 | Ribosomal protein S11 (Ribosomal_S11) | Ribosomal protein S11 | - | Family |
L [auth AM], UB [auth CM] | PF00416 | Ribosomal protein S13/S18 (Ribosomal_S13) | Ribosomal protein S13/S18 | - | Family |
M [auth AN], VB [auth CN] | PF00253 | Ribosomal protein S14p/S29e (Ribosomal_S14) | Ribosomal protein S14p/S29e | - | Family |
N [auth AO], WB [auth CO] | PF00312 | Ribosomal protein S15 (Ribosomal_S15) | Ribosomal protein S15 | - | Domain |
O [auth AP], XB [auth CP] | PF00886 | Ribosomal protein S16 (Ribosomal_S16) | Ribosomal protein S16 | - | Family |
P [auth AQ], YB [auth CQ] | PF00366 | Ribosomal protein S17 (Ribosomal_S17) | Ribosomal protein S17 | - | Domain |
Q [auth AR], ZB [auth CR] | PF01084 | Ribosomal protein S18 (Ribosomal_S18) | Ribosomal protein S18 | - | Family |
AC [auth CS], R [auth AS] | PF00203 | Ribosomal protein S19 (Ribosomal_S19) | Ribosomal protein S19 | - | Domain |
B [auth AC], KB [auth CC] | PF07650 | KH domain (KH_2) | KH domain | - | Domain |
B [auth AC], KB [auth CC] | PF00189 | Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C) | Ribosomal protein S3, C-terminal domain | This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. | Domain |
FC [auth CY], W [auth AY] | PF00679 | Elongation factor G C-terminus (EFG_C) | Elongation factor G C-terminus | This domain includes the carboxyl terminal regions of Elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopt a ferredoxin-like fold. | Domain |
FC [auth CY], W [auth AY] | PF00009 | Elongation factor Tu GTP binding domain (GTP_EFTU) | Elongation factor Tu GTP binding domain | This domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains. | Domain |
FC [auth CY], W [auth AY] | PF14492 | Elongation Factor G, domain III (EFG_III) | Elongation Factor G, domain III | This domain is found in Elongation Factor G. It shares a similar structure with domain V (Pfam:PF00679). Structural studies in drosophila indicate this is domain 3 [1]. | Domain |
FC [auth CY], W [auth AY] | PF03144 | Elongation factor Tu domain 2 (GTP_EFTU_D2) | Elongation factor Tu domain 2 | Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as e ... | Domain |
FC [auth CY], W [auth AY] | PF03764 | Elongation factor G, domain IV (EFG_IV) | Elongation factor G, domain IV | This domain is found in elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopts a ribosomal protein S5 domain 2-like fold. | Domain |
HC [auth DC], Y [auth BC] | PF00687 | Ribosomal protein L1p/L10e family (Ribosomal_L1) | Ribosomal protein L1p/L10e family | This family includes prokaryotic L1 and eukaryotic L10. | Domain |
IC [auth DD], Z [auth BD] | PF03947 | Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C) | Ribosomal Proteins L2, C-terminal domain | - | Domain |
IC [auth DD], Z [auth BD] | PF00181 | Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2) | Ribosomal Proteins L2, RNA binding domain | - | Domain |
AA [auth BE], JC [auth DE] | PF00297 | Ribosomal protein L3 (Ribosomal_L3) | Ribosomal protein L3 | - | Family |
BA [auth BF], KC [auth DF] | PF00573 | Ribosomal protein L4/L1 family (Ribosomal_L4) | Ribosomal protein L4/L1 family | - | Family |
CA [auth BG], LC [auth DG] | PF00281 | Ribosomal protein L5 (Ribosomal_L5) | Ribosomal protein L5 | - | Domain |
CA [auth BG], LC [auth DG] | PF00673 | ribosomal L5P family C-terminus (Ribosomal_L5_C) | ribosomal L5P family C-terminus | This region is found associated with Pfam:PF00281. | Domain |
C [auth AD], LB [auth CD] | PF00163 | Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4) | Ribosomal protein S4/S9 N-terminal domain | - | Family |
C [auth AD], LB [auth CD] | PF01479 | S4 domain (S4) | S4 domain | The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ... | Domain |
DA [auth BH], MC [auth DH] | PF00347 | Ribosomal protein L6 (Ribosomal_L6) | Ribosomal protein L6 | - | Domain |
FA [auth BK], OC [auth DK] | PF03946 | Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N) | Ribosomal protein L11, N-terminal domain | The N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. | Domain |
FA [auth BK], OC [auth DK] | PF00298 | Ribosomal protein L11, RNA binding domain (Ribosomal_L11) | Ribosomal protein L11, RNA binding domain | - | Domain |
GA [auth BN], PC [auth DN] | PF00572 | Ribosomal protein L13 (Ribosomal_L13) | Ribosomal protein L13 | - | Family |
HA [auth BO], QC [auth DO] | PF00238 | Ribosomal protein L14p/L23e (Ribosomal_L14) | Ribosomal protein L14p/L23e | - | Domain |
IA [auth BP], RC [auth DP] | PF00828 | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A) | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A | - | Family |
JA [auth BQ], SC [auth DQ] | PF00252 | Ribosomal protein L16p/L10e (Ribosomal_L16) | Ribosomal protein L16p/L10e | - | Domain |
KA [auth BR], TC [auth DR] | PF01196 | Ribosomal protein L17 (Ribosomal_L17) | Ribosomal protein L17 | - | Family |
LA [auth BS], UC [auth DS] | PF00861 | Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p) | Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast | - | Family |
MA [auth BT], VC [auth DT] | PF01245 | Ribosomal protein L19 (Ribosomal_L19) | Ribosomal protein L19 | - | Family |
D [auth AE], MB [auth CE] | PF03719 | Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C) | Ribosomal protein S5, C-terminal domain | - | Domain |
D [auth AE], MB [auth CE] | PF00333 | Ribosomal protein S5, N-terminal domain (Ribosomal_S5) | Ribosomal protein S5, N-terminal domain | - | Domain |
NA [auth BU], WC [auth DU] | PF00453 | Ribosomal protein L20 (Ribosomal_L20) | Ribosomal protein L20 | - | Family |
OA [auth BV], XC [auth DV] | PF00829 | Ribosomal prokaryotic L21 protein (Ribosomal_L21p) | Ribosomal prokaryotic L21 protein | - | Family |
PA [auth BW], YC [auth DW] | PF00237 | Ribosomal protein L22p/L17e (Ribosomal_L22) | Ribosomal protein L22p/L17e | This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. | Domain |
QA [auth BX], ZC [auth DX] | PF00276 | Ribosomal protein L23 (Ribosomal_L23) | Ribosomal protein L23 | - | Family |
AD [auth DY], RA [auth BY] | PF17136 | Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24) | Ribosomal proteins 50S L24/mitochondrial 39S L24 | - | Family |
AD [auth DY], RA [auth BY] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
BD [auth DZ], SA [auth BZ] | PF14693 | Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C) | Ribosomal protein TL5, C-terminal domain | This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC pr ... | Domain |
BD [auth DZ], SA [auth BZ] | PF01386 | Ribosomal L25p family (Ribosomal_L25p) | Ribosomal L25p family | Ribosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress. | Domain |
DD [auth D2], UA [auth B2] | PF00831 | Ribosomal L29 protein (Ribosomal_L29) | Ribosomal L29 protein | - | Family |
ED [auth D3], VA [auth B3] | PF00327 | Ribosomal protein L30p/L7e (Ribosomal_L30) | Ribosomal protein L30p/L7e | This family includes prokaryotic L30 and eukaryotic L7. | Domain |
FD [auth D5], WA [auth B5] | PF01783 | Ribosomal L32p protein family (Ribosomal_L32p) | Ribosomal L32p protein family | - | Family |
E [auth AF], NB [auth CF] | PF01250 | Ribosomal protein S6 (Ribosomal_S6) | Ribosomal protein S6 | - | Domain |
GD [auth D6], XA [auth B6] | PF00471 | Ribosomal protein L33 (Ribosomal_L33) | Ribosomal protein L33 | - | Family |
HD [auth D7], YA [auth B7] | PF00468 | Ribosomal protein L34 (Ribosomal_L34) | Ribosomal protein L34 | - | Family |
ID [auth D8], ZA [auth B8] | PF01632 | Ribosomal protein L35 (Ribosomal_L35p) | Ribosomal protein L35 | - | Family |
AB [auth B9], JD [auth D9] | PF00444 | Ribosomal protein L36 (Ribosomal_L36) | Ribosomal protein L36 | - | Domain |
BB [auth Be], KD [auth De] | PF16320 | Ribosomal protein L7/L12 dimerisation domain (Ribosomal_L12_N) | Ribosomal protein L7/L12 dimerisation domain | This is the N-terminal dimerisation domain of ribosomal protein L7/L12 [1]. | Domain |
BB [auth Be], KD [auth De] | PF00542 | Ribosomal protein L7/L12 C-terminal domain (Ribosomal_L12) | Ribosomal protein L7/L12 C-terminal domain | - | Domain |
FB [auth B1], OD [auth D1] | PF00830 | Ribosomal L28 family (Ribosomal_L28) | Ribosomal L28 family | - | Family |
GB [auth B4], PD [auth D4] | PF01197 | Ribosomal protein L31 (Ribosomal_L31) | Ribosomal protein L31 | - | Family |
F [auth AG], OB [auth CG] | PF00177 | Ribosomal protein S7p/S5e (Ribosomal_S7) | Ribosomal protein S7p/S5e | This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. | Domain |
H [auth AI], QB [auth CI] | PF00380 | Ribosomal protein S9/S16 (Ribosomal_S9) | Ribosomal protein S9/S16 | - | Family |
I [auth AJ], RB [auth CJ] | PF00338 | Ribosomal protein S10p/S20e (Ribosomal_S10) | Ribosomal protein S10p/S20e | This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. | Domain |