Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
B [auth 1]SCOP2B SuperfamilyTricorn-like8052107 3002094 SCOP2B (2022-06-29)
B [auth 1]SCOP2B SuperfamilyMAC/CDC-like8052038 3002081 SCOP2B (2022-06-29)
CA [auth S]SCOP2 FamilyMACPF-like8049566 4006548 SCOP2 (2022-06-29)
CA [auth S]SCOP2 FamilyC-terminal domain of Pleurotolysin B-like8052106 4007584 SCOP2 (2022-06-29)
CA [auth S]SCOP2 SuperfamilyMAC/CDC-like8052038 3002081 SCOP2 (2022-06-29)
CA [auth S]SCOP2 SuperfamilyTricorn-like8052107 3002094 SCOP2 (2022-06-29)
E [auth 4]SCOP2B SuperfamilyMAC/CDC-like8052038 3002081 SCOP2B (2022-06-29)
E [auth 4]SCOP2B SuperfamilyTricorn-like8052107 3002094 SCOP2B (2022-06-29)
FA [auth V]SCOP2B SuperfamilyMAC/CDC-like8052038 3002081 SCOP2B (2022-06-29)
FA [auth V]SCOP2B SuperfamilyTricorn-like8052107 3002094 SCOP2B (2022-06-29)
H [auth 7]SCOP2B SuperfamilyTricorn-like8052107 3002094 SCOP2B (2022-06-29)
H [auth 7]SCOP2B SuperfamilyMAC/CDC-like8052038 3002081 SCOP2B (2022-06-29)
IA [auth Y]SCOP2B SuperfamilyMAC/CDC-like8052038 3002081 SCOP2B (2022-06-29)
IA [auth Y]SCOP2B SuperfamilyTricorn-like8052107 3002094 SCOP2B (2022-06-29)
KA [auth a]SCOP2B SuperfamilyTricorn-like8052107 3002094 SCOP2B (2022-06-29)
KA [auth a]SCOP2B SuperfamilyMAC/CDC-like8052038 3002081 SCOP2B (2022-06-29)
N [auth D]SCOP2B SuperfamilyMAC/CDC-like8052038 3002081 SCOP2B (2022-06-29)
N [auth D]SCOP2B SuperfamilyTricorn-like8052107 3002094 SCOP2B (2022-06-29)
Q [auth G]SCOP2B SuperfamilyTricorn-like8052107 3002094 SCOP2B (2022-06-29)
Q [auth G]SCOP2B SuperfamilyMAC/CDC-like8052038 3002081 SCOP2B (2022-06-29)
T [auth J]SCOP2B SuperfamilyMAC/CDC-like8052038 3002081 SCOP2B (2022-06-29)
T [auth J]SCOP2B SuperfamilyTricorn-like8052107 3002094 SCOP2B (2022-06-29)
W [auth M]SCOP2B SuperfamilyTricorn-like8052107 3002094 SCOP2B (2022-06-29)
W [auth M]SCOP2B SuperfamilyMAC/CDC-like8052038 3002081 SCOP2B (2022-06-29)
Z [auth P]SCOP2B SuperfamilyMAC/CDC-like8052038 3002081 SCOP2B (2022-06-29)
Z [auth P]SCOP2B SuperfamilyTricorn-like8052107 3002094 SCOP2B (2022-06-29)
K [auth A]SCOP2B SuperfamilyMAC/CDC-like8052038 3002081 SCOP2B (2022-06-29)
K [auth A]SCOP2B SuperfamilyTricorn-like8052107 3002094 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth 0]PF06355e4v2t01 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: PF06355ECOD (1.6)
AA [auth Q]PF06355e4v2tQ1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: PF06355ECOD (1.6)
BA [auth R]PF06355e4v2tR1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: PF06355ECOD (1.6)
C [auth 2]PF06355e4v2t21 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: PF06355ECOD (1.6)
D [auth 3]PF06355e4v2t31 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: PF06355ECOD (1.6)
DA [auth T]PF06355e4v2tT1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: PF06355ECOD (1.6)
EA [auth U]PF06355e4v2tU1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: PF06355ECOD (1.6)
F [auth 5]PF06355e4v2t51 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: PF06355ECOD (1.6)
G [auth 6]PF06355e4v2t61 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: PF06355ECOD (1.6)
GA [auth W]PF06355e4v2tW1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: PF06355ECOD (1.6)
HA [auth X]PF06355e4v2tX1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: PF06355ECOD (1.6)
I [auth 8]PF06355e4v2t81 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: PF06355ECOD (1.6)
J [auth 9]PF06355e4v2t91 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: PF06355ECOD (1.6)
JA [auth Z]PF06355e4v2tZ1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: PF06355ECOD (1.6)
L [auth B]PF06355e4v2tB1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: PF06355ECOD (1.6)
LA [auth b]PF06355e4v2tb1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: PF06355ECOD (1.6)
M [auth C]PF06355e4v2tC1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: PF06355ECOD (1.6)
MA [auth c]PF06355e4v2tc1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: PF06355ECOD (1.6)
O [auth E]PF06355e4v2tE1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: PF06355ECOD (1.6)
P [auth F]PF06355e4v2tF1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: PF06355ECOD (1.6)
R [auth H]PF06355e4v2tH1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: PF06355ECOD (1.6)
S [auth I]PF06355e4v2tI1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: PF06355ECOD (1.6)
U [auth K]PF06355e4v2tK1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: PF06355ECOD (1.6)
V [auth L]PF06355e4v2tL1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: PF06355ECOD (1.6)
X [auth N]PF06355e4v2tN1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: PF06355ECOD (1.6)
Y [auth O]PF06355e4v2tO1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Osmotin-like (From Topology)T: Osmotin-likeF: PF06355ECOD (1.6)
B [auth 1]PF18684e4v2t11 A: beta duplicates or obligate multimersX: Pleurotolysin B C-terminal domain (From Topology)H: Pleurotolysin B C-terminal domain (From Topology)T: Pleurotolysin B C-terminal domainF: PF18684ECOD (1.6)
B [auth 1]PF22693e4v2t12 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: PF22693ECOD (1.6)
CA [auth S]PF18684e4v2tS1 A: beta duplicates or obligate multimersX: Pleurotolysin B C-terminal domain (From Topology)H: Pleurotolysin B C-terminal domain (From Topology)T: Pleurotolysin B C-terminal domainF: PF18684ECOD (1.6)
CA [auth S]PF22693e4v2tS2 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: PF22693ECOD (1.6)
E [auth 4]PF18684e4v2t41 A: beta duplicates or obligate multimersX: Pleurotolysin B C-terminal domain (From Topology)H: Pleurotolysin B C-terminal domain (From Topology)T: Pleurotolysin B C-terminal domainF: PF18684ECOD (1.6)
E [auth 4]PF22693e4v2t42 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: PF22693ECOD (1.6)
FA [auth V]PF18684e4v2tV1 A: beta duplicates or obligate multimersX: Pleurotolysin B C-terminal domain (From Topology)H: Pleurotolysin B C-terminal domain (From Topology)T: Pleurotolysin B C-terminal domainF: PF18684ECOD (1.6)
FA [auth V]PF22693e4v2tV2 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: PF22693ECOD (1.6)
H [auth 7]PF18684e4v2t72 A: beta duplicates or obligate multimersX: Pleurotolysin B C-terminal domain (From Topology)H: Pleurotolysin B C-terminal domain (From Topology)T: Pleurotolysin B C-terminal domainF: PF18684ECOD (1.6)
H [auth 7]PF22693e4v2t71 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: PF22693ECOD (1.6)
IA [auth Y]PF18684e4v2tY2 A: beta duplicates or obligate multimersX: Pleurotolysin B C-terminal domain (From Topology)H: Pleurotolysin B C-terminal domain (From Topology)T: Pleurotolysin B C-terminal domainF: PF18684ECOD (1.6)
IA [auth Y]PF22693e4v2tY1 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: PF22693ECOD (1.6)
KA [auth a]PF18684e4v2ta2 A: beta duplicates or obligate multimersX: Pleurotolysin B C-terminal domain (From Topology)H: Pleurotolysin B C-terminal domain (From Topology)T: Pleurotolysin B C-terminal domainF: PF18684ECOD (1.6)
KA [auth a]PF22693e4v2ta1 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: PF22693ECOD (1.6)
N [auth D]PF18684e4v2tD1 A: beta duplicates or obligate multimersX: Pleurotolysin B C-terminal domain (From Topology)H: Pleurotolysin B C-terminal domain (From Topology)T: Pleurotolysin B C-terminal domainF: PF18684ECOD (1.6)
N [auth D]PF22693e4v2tD2 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: PF22693ECOD (1.6)
Q [auth G]PF18684e4v2tG1 A: beta duplicates or obligate multimersX: Pleurotolysin B C-terminal domain (From Topology)H: Pleurotolysin B C-terminal domain (From Topology)T: Pleurotolysin B C-terminal domainF: PF18684ECOD (1.6)
Q [auth G]PF22693e4v2tG2 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: PF22693ECOD (1.6)
T [auth J]PF18684e4v2tJ2 A: beta duplicates or obligate multimersX: Pleurotolysin B C-terminal domain (From Topology)H: Pleurotolysin B C-terminal domain (From Topology)T: Pleurotolysin B C-terminal domainF: PF18684ECOD (1.6)
T [auth J]PF22693e4v2tJ1 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: PF22693ECOD (1.6)
W [auth M]PF18684e4v2tM2 A: beta duplicates or obligate multimersX: Pleurotolysin B C-terminal domain (From Topology)H: Pleurotolysin B C-terminal domain (From Topology)T: Pleurotolysin B C-terminal domainF: PF18684ECOD (1.6)
W [auth M]PF22693e4v2tM1 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: PF22693ECOD (1.6)
Z [auth P]PF18684e4v2tP1 A: beta duplicates or obligate multimersX: Pleurotolysin B C-terminal domain (From Topology)H: Pleurotolysin B C-terminal domain (From Topology)T: Pleurotolysin B C-terminal domainF: PF18684ECOD (1.6)
Z [auth P]PF22693e4v2tP2 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: PF22693ECOD (1.6)
K [auth A]PF18684e4v2tA1 A: beta duplicates or obligate multimersX: Pleurotolysin B C-terminal domain (From Topology)H: Pleurotolysin B C-terminal domain (From Topology)T: Pleurotolysin B C-terminal domainF: PF18684ECOD (1.6)
K [auth A]PF22693e4v2tA2 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: PF22693ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF06355Aegerolysin (Aegerolysin)Aegerolysin- Family
PF01823MAC/Perforin domain (MACPF)MAC/Perforin domainThe membrane-attack complex (MAC) of the complement system forms transmembrane channels. These channels disrupt the phospholipid bilayer of target cells, leading to cell lysis and death. A number of proteins participate in the assembly of the MAC. Fr ...The membrane-attack complex (MAC) of the complement system forms transmembrane channels. These channels disrupt the phospholipid bilayer of target cells, leading to cell lysis and death. A number of proteins participate in the assembly of the MAC. Freshly activated C5b binds to C6 to form a C5b-6 complex, then to C7 forming the C5b-7 complex. The C5b-7 complex binds to C8, which is composed of three chains (alpha, beta, and gamma), thus forming the C5b-8 complex. C5b-8 subsequently binds to C9 and acts as a catalyst in the polymerisation of C9. Active MAC has a subunit composition of C5b-C6-C7-C8-C9{n}. Perforin is a protein found in cytolytic T-cell and killer cells. In the presence of calcium, perforin polymerises into transmembrane tubules and is capable of lysing, non-specifically, a variety of target cells. There are a number of regions of similarity in the sequences of complement components C6, C7, C8-alpha, C8-beta, C9 and perforin. The X-ray crystal structure of a MACPF domain reveals that it shares a common fold with bacterial cholesterol dependent cytolysins (Pfam:PF01289) such as perfringolysin O. Three key pieces of evidence suggests that MACPF domains and CDCs are homologous: Functional similarity (pore formation), conservation of three glycine residues at a hinge in both families and conservation of a complex core fold [1].
Domain
PF18684Pleurotolysin B C-terminal domain (PlyB_C)Pleurotolysin B C-terminal domainThis a trefoil C-terminal beta-rich domain found in PlyB, one of the components of pleurotolysin (Ply) pore-forming protein. Ply is a membrane attack complex/perforin-like family (MACPF) protein consisting of two components, PlyA and PlyB. PlyB and P ...This a trefoil C-terminal beta-rich domain found in PlyB, one of the components of pleurotolysin (Ply) pore-forming protein. Ply is a membrane attack complex/perforin-like family (MACPF) protein consisting of two components, PlyA and PlyB. PlyB and PlyA act together to form relatively small and regular pores in liposomes. The PlyB C-terminal trefoil sits on top of the PlyA dimer [1].
Domain
K [auth A]PF01823MAC/Perforin domain (MACPF)MAC/Perforin domainThe membrane-attack complex (MAC) of the complement system forms transmembrane channels. These channels disrupt the phospholipid bilayer of target cells, leading to cell lysis and death. A number of proteins participate in the assembly of the MAC. Fr ...The membrane-attack complex (MAC) of the complement system forms transmembrane channels. These channels disrupt the phospholipid bilayer of target cells, leading to cell lysis and death. A number of proteins participate in the assembly of the MAC. Freshly activated C5b binds to C6 to form a C5b-6 complex, then to C7 forming the C5b-7 complex. The C5b-7 complex binds to C8, which is composed of three chains (alpha, beta, and gamma), thus forming the C5b-8 complex. C5b-8 subsequently binds to C9 and acts as a catalyst in the polymerisation of C9. Active MAC has a subunit composition of C5b-C6-C7-C8-C9{n}. Perforin is a protein found in cytolytic T-cell and killer cells. In the presence of calcium, perforin polymerises into transmembrane tubules and is capable of lysing, non-specifically, a variety of target cells. There are a number of regions of similarity in the sequences of complement components C6, C7, C8-alpha, C8-beta, C9 and perforin. The X-ray crystal structure of a MACPF domain reveals that it shares a common fold with bacterial cholesterol dependent cytolysins (Pfam:PF01289) such as perfringolysin O. Three key pieces of evidence suggests that MACPF domains and CDCs are homologous: Functional similarity (pore formation), conservation of three glycine residues at a hinge in both families and conservation of a complex core fold [1].
Domain
K [auth A]PF18684Pleurotolysin B C-terminal domain (PlyB_C)Pleurotolysin B C-terminal domainThis a trefoil C-terminal beta-rich domain found in PlyB, one of the components of pleurotolysin (Ply) pore-forming protein. Ply is a membrane attack complex/perforin-like family (MACPF) protein consisting of two components, PlyA and PlyB. PlyB and P ...This a trefoil C-terminal beta-rich domain found in PlyB, one of the components of pleurotolysin (Ply) pore-forming protein. Ply is a membrane attack complex/perforin-like family (MACPF) protein consisting of two components, PlyA and PlyB. PlyB and PlyA act together to form relatively small and regular pores in liposomes. The PlyB C-terminal trefoil sits on top of the PlyA dimer [1].
Domain