4S0H
TBX5 DB, NKX2.5 HD, ANF DNA Complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | p53-like transcription factors | 8062621 | 3000758 | SCOP2B (2022-06-29) |
C [auth E] | SCOP2B Superfamily | p53-like transcription factors | 8062621 | 3000758 | SCOP2B (2022-06-29) |
B | SCOP2 Family | Homeodomain | 8071005 | 4000291 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Homeodomain-like | 8071006 | 3000001 | SCOP2 (2022-06-29) |
D [auth F] | SCOP2B Superfamily | Homeodomain-like | 8071006 | 3000001 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | T-box | e4s0hA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: T-box | ECOD (1.6) |
C [auth E] | T-box | e4s0hE1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: T-box | ECOD (1.6) |
B | Homeobox | e4s0hB1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: Homeobox | ECOD (1.6) |
D [auth F] | Homeobox | e4s0hF1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: Homeobox | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.820 | Mainly Beta | Sandwich | Immunoglobulin-like | Transcription factor, T-box | CATH (4.3.0) |
C [auth E] | 2.60.40.820 | Mainly Beta | Sandwich | Immunoglobulin-like | Transcription factor, T-box | CATH (4.3.0) |
B | 1.10.10.60 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Homeodomain-like | CATH (4.3.0) |
D [auth F] | 1.10.10.60 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Homeodomain-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth E] | PF00907 | T-box (T-box) | T-box | The T-box encodes a 180 amino acid domain that binds to DNA. Genes encoding T-box proteins are found in a wide range of animals, but not in other kingdoms such as plants. Family members are all thought to bind to the DNA consensus sequence TCACACCT. ... | Domain |
B, D [auth F] | PF00046 | Homeodomain (Homeodomain) | Homeodomain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, C [auth E] | IPR001699 | T-box transcription factor | Family |
A, C [auth E] | IPR036960 | T-box superfamily | Homologous Superfamily |
A, C [auth E] | IPR046360 | T-box transcription factor, DNA-binding domain | Domain |
A, C [auth E] | IPR018186 | Transcription factor, T-box, conserved site | Conserved Site |
A, C [auth E] | IPR008967 | p53-like transcription factor, DNA-binding domain superfamily | Homologous Superfamily |
B, D [auth F] | IPR009057 | Homeobox-like domain superfamily | Homologous Superfamily |
B, D [auth F] | IPR020479 | Homeobox domain, metazoa | Domain |
B, D [auth F] | IPR001356 | Homeobox domain | Domain |
B, D [auth F] | IPR017970 | Homeobox, conserved site | Conserved Site |