4PQK
C-Terminal domain of DNA binding protein
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Type 2 solute binding protein-like | 8058187 | 3000083 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Type 2 solute binding protein-like | 8058187 | 3000083 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Type 2 solute binding protein-like | 8058187 | 3000083 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Type 2 solute binding protein-like | 8058187 | 3000083 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF18008 | e4pqkA2 | A: alpha arrays | X: DnaD domain (From Topology) | H: DnaD domain (From Topology) | T: DnaD domain | F: PF18008 | ECOD (1.6) |
A | PF01547 | e4pqkA1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: PF01547 | ECOD (1.6) |
B | PF18008 | e4pqkB2 | A: alpha arrays | X: DnaD domain (From Topology) | H: DnaD domain (From Topology) | T: DnaD domain | F: PF18008 | ECOD (1.6) |
B | PF01547 | e4pqkB3 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: PF01547 | ECOD (1.6) |
C | PF18008 | e4pqkC2 | A: alpha arrays | X: DnaD domain (From Topology) | H: DnaD domain (From Topology) | T: DnaD domain | F: PF18008 | ECOD (1.6) |
C | PF01547 | e4pqkC3 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: PF01547 | ECOD (1.6) |
D | PF18008 | e4pqkD2 | A: alpha arrays | X: DnaD domain (From Topology) | H: DnaD domain (From Topology) | T: DnaD domain | F: PF18008 | ECOD (1.6) |
D | PF01547 | e4pqkD1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: PF01547 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01547 | Bacterial extracellular solute-binding protein (SBP_bac_1) | Bacterial extracellular solute-binding protein | - | Family | |
PF18008 | Replication initiator protein A C-terminal domain (Bac_RepA_C) | Replication initiator protein A C-terminal domain | This is the C-terminal domain (CTD) that can be found in the conserved replication initiator, RepA,essential for staphylococcal propagation. RepA CTD shared the strongest structural homology to the Enterococcus faecalis DnaD CTD, yet perform distinc ... | Domain |