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Crystal structure of the antibody-binding region of Protein M (Protein M TD) in complex with anti-infleunza hemagglutinin antibody CR9114 Fab External Resource: Annotation Chains Family Name Domain Identifier Architecture Possible Homology Homology Topology Family Provenance Source (Version) A [auth M] PF20757,PF22805 e4nztM1 A: beta duplicates or obligate multimers X: Single-stranded right-handed beta-helix H: Protein M antibody-binding region (From Topology) T: Protein M antibody-binding region F: PF20757,PF22805 ECOD (1.6) B [auth H] PF07654 e4nztH1 A: beta sandwiches X: Immunoglobulin-like beta-sandwich H: Immunoglobulin-related T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like F: PF07654 ECOD (1.6) C [auth L] PF07654 e4nztL1 A: beta sandwiches X: Immunoglobulin-like beta-sandwich H: Immunoglobulin-related T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like F: PF07654 ECOD (1.6) C [auth L] PF07686 e4nztL2 A: beta sandwiches X: Immunoglobulin-like beta-sandwich H: Immunoglobulin-related T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like F: PF07686 ECOD (1.6)
Chain Protein Name Description Organism Name Gene Allele Name(s) Domain Name(s) Receptor Type Receptor Description Provenance Source B [auth H] CR9114 VH-CH1 Homo sapiens (human) IGHV1-69*01, IGHV1-69*06, IGHV1-69*12, IGHV1-69*13, IGHV1-69*14, IGHV1-69D*01, IGHJ6*01, IGHJ6*02, IGHG1*03 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-1_LAMBDA IMGT (202416-0) C [auth L] CR9114 L-LAMBDA Homo sapiens (human) IGLV1-44*01, IGLJ7*01, IGLC2*01, IGLC2*02, IGLC3*04 V-DOMAIN V-LAMBDA, C-DOMAIN C-LAMBDA IG FAB-GAMMA-1_LAMBDA IMGT (202416-0)
Chain Chain Class Chain Subclass Chain Type Antigen Name(s) Provenance Source B [auth H] Heavy Chain IGHV1 - protein m td SAbDab (2024-04-26) C [auth L] Light Chain IGLV1 Lambda protein m td SAbDab (2024-04-26)
Chains Accession Name Description Comments Source A [auth M] PF20757 Protein M antibody-binding region (M_Ab-bd) Protein M antibody-binding region This domain is found in proteins from Mycoplasmaceae, including Uncharacterized protein MG281 from Mycoplasma genitalium, also known as protein M. This virulence protein consists of two domains. The larger one (this entry) binds the IgG light chain t ... This domain is found in proteins from Mycoplasmaceae, including Uncharacterized protein MG281 from Mycoplasma genitalium, also known as protein M. This virulence protein consists of two domains. The larger one (this entry) binds the IgG light chain to block the binding of antibody to antigen. It includes a leucine-rich repeat (LRR)-like subdomain, which faces away from the antibody molecule [1]. Less Domain
Chains Polymer Molecular Function Biological Process Cellular Component A [auth M] Protein M TD - - B [auth H] CR9114 heavy chain - - - C [auth L] CR9114 light chain - - -