Annotations: 4KZY

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Ribosomal protein S2-like	8044909	4003744	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	SIS domain/Ribosomal protein S2-like	8052790	3001397	SCOP2 (2022-06-29)
B	SCOP2 Family	Ribosomal S3Ae	8048446	4006095	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	Ribosomal S3Ae-like	8053208	3002166	SCOP2 (2022-06-29)
E	SCOP2 Family	Eukaryotic ribosomal protein S4e-like	8050326	4006847	SCOP2 (2022-06-29)
E	SCOP2 Family	Cold shock DNA-binding domain-like	8048388	4001909	SCOP2 (2022-06-29)
E	SCOP2 Family	Ribosomal protein S4e C-terminal KOW domain-like	8044894	4004197	SCOP2 (2022-06-29)
E	SCOP2 Superfamily	Alpha-L RNA-binding motif	8052745	3001473	SCOP2 (2022-06-29)
E	SCOP2 Superfamily	Nucleic acid-binding proteins	8052746	3000135	SCOP2 (2022-06-29)
E	SCOP2 Superfamily	Translation proteins SH3-like KOW motif containing domain	8052747	3000334	SCOP2 (2022-06-29)
F	SCOP2B Superfamily	Ribosomal protein S7	8066001	3000799	SCOP2B (2022-06-29)
I	SCOP2 Family	Ribosomal protein S8e	8048716	4006189	SCOP2 (2022-06-29)
I	SCOP2 Superfamily	50S Ribosomal protein L14-like	8053075	3000433	SCOP2 (2022-06-29)
L	SCOP2 Family	Cold shock DNA-binding domain-like	8052706	4001909	SCOP2 (2022-06-29)
L	SCOP2 Family	Ribosomal S17 N-terminal domain-like	8045081	4004290	SCOP2 (2022-06-29)
L	SCOP2 Superfamily	Nucleic acid-binding proteins	8052707	3000135	SCOP2 (2022-06-29)
L	SCOP2 Superfamily	Ribosomal S17 N-terminal domain-like	8052708	3002138	SCOP2 (2022-06-29)
M	SCOP2B Superfamily	L30e-like	8063980	3001739	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	Translational machinery components	8097832	3000571	SCOP2B (2022-06-29)
Q	SCOP2B Superfamily	Ribosomal protein S5 domain 2-like	8082683	3000100	SCOP2B (2022-06-29)
S	SCOP2B Superfamily	S13-like H2TH domain	8101439	3000053	SCOP2B (2022-06-29)
T	SCOP2B Superfamily	Winged helix DNA-binding domain	8089322	3000034	SCOP2B (2022-06-29)
U	SCOP2 Family	Ribosomal protein S10	8097813	4001240	SCOP2 (2022-06-29)
U	SCOP2 Superfamily	Ribosomal protein S10	8097814	3001336	SCOP2 (2022-06-29)
AA [auth a]	SCOP2 Family	Ribosomal protein S26e	8048836	4006236	SCOP2 (2022-06-29)
AA [auth a]	SCOP2 Superfamily	Glucocorticoid receptor-like (DNA-binding domain)	8053150	3000068	SCOP2 (2022-06-29)
CA [auth c]	SCOP2B Superfamily	Nucleic acid-binding proteins	8095265	3000135	SCOP2B (2022-06-29)
DA [auth d]	SCOP2 Family	Ribosomal protein S14p/S29e	8047578	4003647	SCOP2 (2022-06-29)
DA [auth d]	SCOP2 Superfamily	Glucocorticoid receptor-like (DNA-binding domain)	8052584	3000068	SCOP2 (2022-06-29)
EA [auth e]	SCOP2 Family	Ribosomal protein S30e-like	8046413	4005067	SCOP2 (2022-06-29)
EA [auth e]	SCOP2 Superfamily	Ribosomal protein S30e-like	8053455	3002190	SCOP2 (2022-06-29)
GA [auth g]	SCOP2B Superfamily	WD40 repeat-like	8097816	3001694	SCOP2B (2022-06-29)
K	SCOP2 Family	eS10-like	8051609	4007434	SCOP2 (2022-06-29)
K	SCOP2 Superfamily	Winged helix DNA-binding domain	8055712	3000034	SCOP2 (2022-06-29)
N	SCOP2 Family	30S Ribosomal protein S15 / 40S Ribosomal protein S13	8052969	4000767	SCOP2 (2022-06-29)
N	SCOP2 Family	40S Ribosomal protein S13 N-terminal domain-like	8050308	4006843	SCOP2 (2022-06-29)
N	SCOP2 Superfamily	S15/NS1 RNA-binding domain	8052971	3001284	SCOP2 (2022-06-29)
N	SCOP2 Superfamily	Homeodomain-like	8052970	3000001	SCOP2 (2022-06-29)
V	SCOP2 Family	Ribosomal protein S21e	8048776	4006215	SCOP2 (2022-06-29)
V	SCOP2 Superfamily	Glucocorticoid receptor-like (DNA-binding domain)	8053140	3000068	SCOP2 (2022-06-29)
W	SCOP2B Superfamily	Ribosomal protein S8	8079081	3000709	SCOP2B (2022-06-29)
Z	SCOP2 Family	Ribosomal protein S25-like	8051323	4007308	SCOP2 (2022-06-29)
Z	SCOP2 Superfamily	Winged helix DNA-binding domain	8090991	3000034	SCOP2 (2022-06-29)
G	SCOP2 Family	Ribosomal protein S6e	8048556	4006143	SCOP2 (2022-06-29)
G	SCOP2 Superfamily	GS N-terminal domain-like	8053172	3000408	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Ribosomal_S2_2	e4kzyA1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Ribosomal protein S2/SIS domain (From Topology)	T: Ribosomal protein S2/SIS domain	F: Ribosomal_S2_2	ECOD (1.6)
B	Ribosomal_S3Ae_N	e4kzyB1	A: beta barrels	X: Ribosomal protein L25-like	H: 40S ribosomal protein S3A N-terminal domain (From Topology)	T: 40S ribosomal protein S3A N-terminal domain	F: Ribosomal_S3Ae_N	ECOD (1.6)
B	Ribosomal_S3Ae_C	e4kzyB2	A: a+b two layers	X: T-fold	H: 40S ribosomal protein S3A C-terminal domain (From Topology)	T: 40S ribosomal protein S3A C-terminal domain	F: Ribosomal_S3Ae_C	ECOD (1.6)
D	Ribosomal_S3_C	e4kzyD1	A: a+b two layers	X: T-fold	H: Ribosomal protein S3-C (From Topology)	T: Ribosomal protein S3-C	F: Ribosomal_S3_C	ECOD (1.6)
D	KH_2_3	e4kzyD3	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: KH-domains	T: Prokaryotic type KH domain (KH-domain type II)	F: KH_2_3	ECOD (1.6)
E	Ribosomal_S4e	e4kzyE2	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_S4e	ECOD (1.6)
E	40S_S4_C	e4kzyE1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: 40S_S4_C	ECOD (1.6)
E	RS4NT	e4kzyE3	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Alpha-L RNA-binding motif	F: RS4NT	ECOD (1.6)
F	Ribosomal_S7_1	e4kzyF1	A: alpha arrays	X: Ribosomal protein S7 (From Topology)	H: Ribosomal protein S7 (From Topology)	T: Ribosomal protein S7	F: Ribosomal_S7_1	ECOD (1.6)
H	Ribosomal_S7e_N	e4kzyH2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: 40S ribosomal protein S7-A (From Topology)	T: 40S ribosomal protein S7-A	F: Ribosomal_S7e_N	ECOD (1.6)
H	Ribosomal_S7e_C_1	e4kzyH1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: 40S ribosomal protein S7-A (From Topology)	T: 40S ribosomal protein S7-A	F: Ribosomal_S7e_C_1	ECOD (1.6)
I	Ribosomal_S8e	e4kzyI1	A: beta barrels	X: Ribosomal protein L14-like	H: Ribosomal protein L14-related (From Topology)	T: Ribosomal protein L14-related	F: Ribosomal_S8e	ECOD (1.6)
J	S4	e4kzyJ1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Alpha-L RNA-binding motif	F: S4	ECOD (1.6)
L	Ribosomal_S17_1	e4kzyL1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_S17_1	ECOD (1.6)
M	Ribosomal_L7Ae	e4kzyM1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: L30e-like (From Topology)	T: L30e-like	F: Ribosomal_L7Ae	ECOD (1.6)
O	Ribosomal_S11	e4kzyO1	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: Ribosomal_S11	ECOD (1.6)
P	Ribosomal_S19	e4kzyP1	A: a+b two layers	X: Ribosomal protein S19 (From Topology)	H: Ribosomal protein S19 (From Topology)	T: Ribosomal protein S19	F: Ribosomal_S19	ECOD (1.6)
Q	Ribosomal_S9	e4kzyQ1	A: a+b two layers	X: Ribosomal protein S5 domain 2-like (From Topology)	H: Ribosomal protein S5 domain 2-like (From Topology)	T: Ribosomal protein S5 domain 2-like	F: Ribosomal_S9	ECOD (1.6)
S	Ribosomal_S13	e4kzyS1	A: alpha arrays	X: HhH/H2TH	H: H2TH (From Topology)	T: H2TH	F: Ribosomal_S13	ECOD (1.6)
T	Ribosomal_S19e	e4kzyT1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: Ribosomal_S19e	ECOD (1.6)
U	Ribosomal_S10_1	e4kzyU1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal protein S10 (From Topology)	T: Ribosomal protein S10	F: Ribosomal_S10_1	ECOD (1.6)
X	Ribosom_S12_S23	e4kzyX1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosom_S12_S23	ECOD (1.6)
AA [auth a]	Ribosomal_S26e	e4kzya1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: Ribosomal_S26e	ECOD (1.6)
BA [auth b]	Ribosomal_S27e	e4kzyb1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_S27e	ECOD (1.6)
CA [auth c]	Ribosomal_S28e	e4kzyc1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_S28e	ECOD (1.6)
DA [auth d]	Ribosomal_S14_2	e4kzyd1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: Ribosomal_S14_2	ECOD (1.6)
EA [auth e]	Ribosomal_S30	e4kzye1	A: extended segments	X: 40S ribosomal protein S30 (S30e) (From Topology)	H: 40S ribosomal protein S30 (S30e) (From Topology)	T: 40S ribosomal protein S30 (S30e)	F: Ribosomal_S30	ECOD (1.6)
FA [auth f]	Ribosomal_S27	e4kzyf1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_S27	ECOD (1.6)
GA [auth g]	DUF1899	e4kzyg1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: DUF1899	ECOD (1.6)
IA [auth l]	SUI1	e4kzyl1	A: a+b two layers	X: Glucose permease domain IIB-like	H: eIF1-like (From Topology)	T: eIF1-like	F: SUI1	ECOD (1.6)
JA [auth n]	eIF-1a	e4kzyn1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: eIF-1a	ECOD (1.6)
K	S10_plectin	e4kzyK1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: S10_plectin	ECOD (1.6)
N	Ribosomal_S13_N	e4kzyN2	A: alpha arrays	X: HTH	H: 40S ribosomal protein S13 N-terminal domain (From Topology)	T: 40S ribosomal protein S13 N-terminal domain	F: Ribosomal_S13_N	ECOD (1.6)
N	Ribosomal_S15_2	e4kzyN1	A: alpha arrays	X: S15/NS1 RNA-binding domain (From Topology)	H: S15/NS1 RNA-binding domain (From Topology)	T: S15/NS1 RNA-binding domain	F: Ribosomal_S15_2	ECOD (1.6)
R	Ribosomal_S17e	e4kzyR1	A: alpha arrays	X: HTH	H: HTH	T: FF domain	F: Ribosomal_S17e	ECOD (1.6)
V	Ribosomal_S21e	e4kzyV1	A: a+b two layers	X: 40S ribosomal protein rpS21 (S21e) (From Topology)	H: 40S ribosomal protein rpS21 (S21e) (From Topology)	T: 40S ribosomal protein rpS21 (S21e)	F: Ribosomal_S21e	ECOD (1.6)
W	Ribosomal_S8_N_1	e4kzyW1	A: a+b two layers	X: R3H domain-like	H: Ribosomal protein S8, N-terminal domain (From Topology)	T: Ribosomal protein S8, N-terminal domain	F: Ribosomal_S8_N_1	ECOD (1.6)
W	Ribosomal_S8_C_1	e4kzyW2	A: a+b two layers	X: Ribosomal protein S8, C-terminal domain (From Topology)	H: Ribosomal protein S8, C-terminal domain (From Topology)	T: Ribosomal protein S8, C-terminal domain	F: Ribosomal_S8_C_1	ECOD (1.6)
Y	Ribosomal_S24e	e4kzyY1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal proteins S24e, L23 and L15e (From Topology)	T: Ribosomal proteins S24e, L23 and L15e	F: Ribosomal_S24e	ECOD (1.6)
Z	Ribosomal_S25	e4kzyZ1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: Ribosomal_S25	ECOD (1.6)
C	Ribosomal_S5_C_1	e4kzyC3	A: a+b two layers	X: Ribosomal protein S5 domain 2-like (From Topology)	H: Ribosomal protein S5 domain 2-like (From Topology)	T: Ribosomal protein S5 domain 2-like	F: Ribosomal_S5_C_1	ECOD (1.6)
C	Ribosomal_S5_3	e4kzyC1	A: a+b two layers	X: dsRBD-like	H: dsRNA-binding domain-like (From Topology)	T: dsRNA-binding domain-like	F: Ribosomal_S5_3	ECOD (1.6)
C	Ribosomal_S5_2	e4kzyC2	A: extended segments	X: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)	H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)	T: N-terminal region in 40S ribosomal protein rpS2 (S5p)	F: Ribosomal_S5_2	ECOD (1.6)
G	Ribosomal_S6e	e4kzyG1	A: beta barrels	X: Ribosomal protein L25-like	H: Ribosomal protein L25-like (From Topology)	T: Ribosomal protein L25-like	F: Ribosomal_S6e	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00318	Ribosomal protein S2 (Ribosomal_S2)	Ribosomal protein S2	-	Family
A	PF16122	40S ribosomal protein SA C-terminus (40S_SA_C)	40S ribosomal protein SA C-terminus	-	Family
B	PF01015	Ribosomal S3Ae family (Ribosomal_S3Ae)	Ribosomal S3Ae family	-	Family
D	PF07650	KH domain (KH_2)	KH domain	-	Domain
D	PF00189	Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)	Ribosomal protein S3, C-terminal domain	This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.	Domain
E	PF00900	Ribosomal family S4e (Ribosomal_S4e)	Ribosomal family S4e	-	Family
E	PF16121	40S ribosomal protein S4 C-terminus (40S_S4_C)	40S ribosomal protein S4 C-terminus	-	Family
E	PF08071	RS4NT (NUC023) domain (RS4NT)	RS4NT (NUC023) domain	This is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].	Domain
E	PF00467	KOW motif (KOW)	KOW motif	-	Family
F	PF00177	Ribosomal protein S7p/S5e (Ribosomal_S7)	Ribosomal protein S7p/S5e	This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.	Domain
H	PF01251	Ribosomal protein S7e (Ribosomal_S7e)	Ribosomal protein S7e	-	Family
I	PF01201	Ribosomal protein S8e (Ribosomal_S8e)	Ribosomal protein S8e	-	Family
J	PF00163	Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)	Ribosomal protein S4/S9 N-terminal domain	-	Family
J	PF01479	S4 domain (S4)	S4 domain	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.	Domain
L	PF00366	Ribosomal protein S17 (Ribosomal_S17)	Ribosomal protein S17	-	Domain
L	PF16205	Ribosomal_S17 N-terminal (Ribosomal_S17_N)	Ribosomal_S17 N-terminal	-	Family
M	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].	Domain
O	PF00411	Ribosomal protein S11 (Ribosomal_S11)	Ribosomal protein S11	-	Family
P	PF00203	Ribosomal protein S19 (Ribosomal_S19)	Ribosomal protein S19	-	Domain
Q	PF00380	Ribosomal protein S9/S16 (Ribosomal_S9)	Ribosomal protein S9/S16	-	Family
S	PF00416	Ribosomal protein S13/S18 (Ribosomal_S13)	Ribosomal protein S13/S18	-	Family
T	PF01090	Ribosomal protein S19e (Ribosomal_S19e)	Ribosomal protein S19e	-	Family
U	PF00338	Ribosomal protein S10p/S20e (Ribosomal_S10)	Ribosomal protein S10p/S20e	This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.	Domain
X	PF00164	Ribosomal protein S12/S23 (Ribosom_S12_S23)	Ribosomal protein S12/S23	-	Family
AA [auth a]	PF01283	Ribosomal protein S26e (Ribosomal_S26e)	Ribosomal protein S26e	-	Family
BA [auth b]	PF01667	Ribosomal protein S27 (Ribosomal_S27e)	Ribosomal protein S27	-	Family
CA [auth c]	PF01200	Ribosomal protein S28e (Ribosomal_S28e)	Ribosomal protein S28e	-	Family
DA [auth d]	PF00253	Ribosomal protein S14p/S29e (Ribosomal_S14)	Ribosomal protein S14p/S29e	-	Family
EA [auth e]	PF04758	Ribosomal protein S30 (Ribosomal_S30)	Ribosomal protein S30	-	Family
FA [auth f]	PF01599	Ribosomal protein S27a (Ribosomal_S27)	Ribosomal protein S27a	This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...	This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].	Domain
GA [auth g]	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat
IA [auth l]	PF01253	Translation initiation factor SUI1 (SUI1)	Translation initiation factor SUI1	-	Domain
JA [auth n]	PF01176	Translation initiation factor 1A / IF-1 (eIF-1a)	Translation initiation factor 1A / IF-1	This family includes both the eukaryotic translation factor eIF-1A and the bacterial translation initiation factor IF-1.	Domain
K	PF03501	Plectin/S10 domain (S10_plectin)	Plectin/S10 domain	This presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.	Domain
N	PF08069	Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)	Ribosomal S13/S15 N-terminal domain	This domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].	Domain
N	PF00312	Ribosomal protein S15 (Ribosomal_S15)	Ribosomal protein S15	-	Domain
R	PF00833	Ribosomal S17 (Ribosomal_S17e)	Ribosomal S17	-	Family
V	PF01249	Ribosomal protein S21e (Ribosomal_S21e)	Ribosomal protein S21e	-	Family
W	PF00410	Ribosomal protein S8 (Ribosomal_S8)	Ribosomal protein S8	-	Domain
Y	PF01282	Ribosomal protein S24e (Ribosomal_S24e)	Ribosomal protein S24e	-	Family
Z	PF03297	S25 ribosomal protein (Ribosomal_S25)	S25 ribosomal protein	-	Family
C	PF03719	Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)	Ribosomal protein S5, C-terminal domain	-	Domain
C	PF00333	Ribosomal protein S5, N-terminal domain (Ribosomal_S5)	Ribosomal protein S5, N-terminal domain	-	Domain
G	PF01092	Ribosomal protein S6e (Ribosomal_S6e)	Ribosomal protein S6e	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	40S Ribosomal Protein SA	structural molecule activity structural constituent of ribosome extracellular matrix binding binding protein binding laminin binding cell adhesion molecule binding laminin receptor activity cell adhesion mediator activity	ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization non-membrane-bounded organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization non-membrane-bounded organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly cellular process cellular component organization or biogenesis ribosome assembly organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process protein metabolic process macromolecule metabolic process	cell periphery plasma membrane membrane cellular anatomical entity cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular organelle ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle cell periphery plasma membrane membrane cellular anatomical entity cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular organelle ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle ribosome cytoplasm cytosol non-membrane-bounded organelle membrane-bounded organelle nucleus intracellular membrane-bounded organelle
B	40S Ribosomal Protein S3A	structural molecule activity structural constituent of ribosome	developmental process cellular developmental process cell differentiation cellular process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process developmental process cellular developmental process cell differentiation cellular process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process protein metabolic process macromolecule metabolic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle cellular anatomical entity nucleolus intracellular organelle lumen intracellular organelle organelle lumen organelle intracellular non-membrane-bounded organelle nuclear lumen non-membrane-bounded organelle membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle cellular anatomical entity nucleolus intracellular organelle lumen intracellular organelle organelle lumen organelle intracellular non-membrane-bounded organelle nuclear lumen non-membrane-bounded organelle cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit cytosolic ribosome ribonucleoprotein complex ribosome cytoplasm cytosol
D	40S Ribosomal Protein S3	-	-	-
E	40S Ribosomal Protein S4X	-	-	-
F	40S Ribosomal Protein S5	-	-	-
H	40S Ribosomal Protein S7	-	-	-
I	40S Ribosomal Protein S8	-	-	-
J	40S Ribosomal Protein S9	-	-	-
L	40S Ribosomal Protein S11	-	-	-
M	40S Ribosomal Protein S12	-	-	-
O	40S Ribosomal Protein S14	-	-	-
P	40S Ribosomal Protein S15	-	-	-
Q	40S Ribosomal Protein S16	-	-	-
S	40S Ribosomal Protein S18	-	-	-
T	40S Ribosomal Protein S19	-	-	-
U	40S Ribosomal Protein S20	-	-	-
X	40S Ribosomal Protein S23	-	-	-
AA [auth a]	40S Ribosomal Protein S26	-	-	-
BA [auth b]	40S Ribosomal Protein S27	-	-	-
CA [auth c]	40S Ribosomal Protein S28	-	-	-
DA [auth d]	40S Ribosomal Protein S29	-	-	-
EA [auth e]	40S Ribosomal Protein S30	-	-	-
FA [auth f]	40S Ribosomal Protein S27A	-	-	-
GA [auth g]	40S Ribosomal Protein RACK1	-	-	-
HA [auth i]	18S Ribosomal RNA	-	-	-
IA [auth l]	human initiation factor eIF1	translation regulator activity binding organic cyclic compound binding translation regulator activity, nucleic acid binding nucleic acid binding translation initiation factor activity translation factor activity, RNA binding RNA binding ribonucleoprotein complex binding protein-containing complex binding ribosomal small subunit binding ribosome binding	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process translational initiation metabolic process cellular process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process translational initiation metabolic process cellular process protein metabolic process macromolecule metabolic process regulation of cellular process regulation of primary metabolic process post-transcriptional regulation of gene expression regulation of biosynthetic process regulation of biological process regulation of translational initiation regulation of protein metabolic process biological regulation regulation of cellular metabolic process regulation of macromolecule metabolic process regulation of cellular biosynthetic process regulation of gene expression regulation of translation regulation of macromolecule biosynthetic process regulation of metabolic process positive regulation of mRNA cis splicing, via spliceosome regulation of mRNA splicing, via spliceosome mRNA processing positive regulation of macromolecule biosynthetic process regulation of mRNA cis splicing, via spliceosome nucleobase-containing compound metabolic process positive regulation of metabolic process regulation of RNA metabolic process positive regulation of macromolecule metabolic process RNA processing regulation of nucleobase-containing compound metabolic process positive regulation of nucleobase-containing compound metabolic process positive regulation of mRNA metabolic process positive regulation of RNA metabolic process organic cyclic compound metabolic process mRNA cis splicing, via spliceosome positive regulation of mRNA processing positive regulation of mRNA splicing, via spliceosome positive regulation of biological process RNA metabolic process positive regulation of cellular metabolic process positive regulation of biosynthetic process positive regulation of cellular process regulation of mRNA processing RNA splicing regulation of RNA splicing mRNA metabolic process nucleic acid metabolic process RNA splicing, via transesterification reactions positive regulation of gene expression mRNA splicing, via spliceosome RNA splicing, via transesterification reactions with bulged adenosine as nucleophile regulation of mRNA metabolic process positive regulation of RNA splicing positive regulation of cellular biosynthetic process	protein-containing complex translation preinitiation complex intracellular anatomical structure eukaryotic 43S preinitiation complex ribonucleoprotein complex cytoplasm cellular anatomical entity multi-eIF complex eukaryotic 48S preinitiation complex membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle
JA [auth n]	human initiation factor eIF1A	translation regulator activity binding organic cyclic compound binding translation regulator activity, nucleic acid binding nucleic acid binding translation initiation factor activity translation factor activity, RNA binding RNA binding tRNA binding	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process translational initiation metabolic process cellular process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process translational initiation metabolic process cellular process protein metabolic process macromolecule metabolic process ribonucleoprotein complex biogenesis organelle assembly non-membrane-bounded organelle assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization cellular component assembly cellular component organization or biogenesis ribosome assembly	protein-containing complex translation preinitiation complex intracellular anatomical structure eukaryotic 43S preinitiation complex ribonucleoprotein complex cytoplasm cellular anatomical entity multi-eIF complex synapse cell junction cytosol eukaryotic 48S preinitiation complex
K	40S Ribosomal Protein S10	-	-	-
N	40S Ribosomal Protein S13	-	-	-
R	40S Ribosomal Protein S17	-	-	-
V	40S Ribosomal Protein S21	-	-	-
W	40S Ribosomal Protein S15A	-	-	-
Y	40S Ribosomal Protein S24	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	ribosomal subunit intracellular organelle protein-containing complex intracellular anatomical structure organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
Z	40S Ribosomal Protein S25	-	-	-
C	40S Ribosomal Protein S2	RNA binding binding organic cyclic compound binding nucleic acid binding structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure small ribosomal subunit cellular anatomical entity ribosomal subunit intracellular organelle organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle ribosome non-membrane-bounded organelle cytosolic ribosome cytoplasm cytosol
G	40S Ribosomal Protein S6	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR032281	Small ribosomal subunit protein uS2, C-terminal domain	Domain
A	IPR027504	Small ribosomal subunit protein uS2, vertebrates	Family
A	IPR005707	Small ribosomal subunit protein uS2, eukaryotic/archaeal	Family
A	IPR023591	Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily	Homologous Superfamily
A	IPR018130	Small ribosomal subunit protein uS2, conserved site	Conserved Site
A	IPR001865	Small ribosomal subunit protein uS2	Family
A	IPR027498	Small ribosomal subunit protein uS2, eukaryotic	Family
B	IPR001593	Small ribosomal subunit protein eS1	Family
B	IPR018281	Small ribosomal subunit protein eS1, conserved site	Conserved Site
B	IPR027500	Small ribosomal subunit protein eS1, eukaryotes	Family
IA [auth l]	IPR005874	Eukaryotic translation initiation factor SUI1	Family
IA [auth l]	IPR001950	SUI1 domain	Domain
IA [auth l]	IPR036877	SUI1 domain superfamily	Homologous Superfamily
JA [auth n]	IPR018104	Translation initiation factor 1A (eIF-1A), conserved site	Conserved Site
JA [auth n]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
JA [auth n]	IPR006196	RNA-binding domain, S1, IF1 type	Domain
JA [auth n]	IPR001253	Translation initiation factor 1A (eIF-1A)	Family
Y	IPR001976	Small ribosomal subunit protein eS24	Family
Y	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
Y	IPR018098	Small ribosomal subunit protein eS24 conserved site	Conserved Site
C	IPR000851	Small ribosomal subunit protein uS5	Family
C	IPR005711	Small ribosomal subunit protein uS5, eukaryotic/archaeal	Family
C	IPR005324	Small ribosomal subunit protein uS5, C-terminal	Domain
C	IPR013810	Small ribosomal subunit protein uS5, N-terminal	Domain
C	IPR020568	Ribosomal protein uS5 domain 2-type superfamily	Homologous Superfamily
C	IPR018192	Small ribosomal subunit protein uS5, N-terminal, conserved site	Conserved Site
C	IPR014721	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
IA [auth l]	Pharos: P41567	pterygium spina bifida tuberculosis atypical teratoid rhabdoid tumor ductal breast carcinoma in situ large cell medulloblastoma malignant ependymoma non-small cell lung carcinoma pancreatic intraductal papillary-mucinous neoplasm primitive neuroectodermal tumor rheumatoid arthritis squamous cell carcinoma breast cancer glioblastoma lung cancer pterygium spina bifida tuberculosis atypical teratoid rhabdoid tumor ductal breast carcinoma in situ large cell medulloblastoma malignant ependymoma non-small cell lung carcinoma pancreatic intraductal papillary-mucinous neoplasm primitive neuroectodermal tumor rheumatoid arthritis squamous cell carcinoma breast cancer glioblastoma lung cancer malignant glioma osteosarcoma pilocytic astrocytoma psoriasis sarcoidosis subependymal giant cell astrocytoma carcinoma of esophagus invasive ductal breast carcinoma malignant colon neoplasm medulloblastoma ovarian cancer plasma cell myeloma
JA [auth n]	Pharos: P47813	uveal melanoma Neoplasm Metastasis atypical teratoid rhabdoid tumor ovarian cancer sarcoidosis breast cancer ocular melanoma pancreatic intraductal papillary-mucinous neoplasm thyroid gland papillary carcinoma lung cancer osteosarcoma psoriasis

4KZY

Rabbit 40S ribosomal subunit in complex with eIF1 and eIF1A.

External Resource: Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

Pharos: Disease Associations Pharos Homepage Annotation

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4KZY

Rabbit 40S ribosomal subunit in complex with eIF1 and eIF1A.

External Resource: Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

Pharos: Disease Associations Pharos Homepage Annotation