Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APBP5_Ce4k91A1 A: beta sandwichesX: Penicillin-binding protein associated domain (From Topology)H: Penicillin-binding protein associated domain (From Topology)T: Penicillin-binding protein associated domainF: PBP5_CECOD (1.6)
APeptidase_S11_1ste4k91A2 A: alpha complex topologyX: alpha-helical domain in beta-lactamase/transpeptidase-like proteins (From Topology)H: alpha-helical domain in beta-lactamase/transpeptidase-like proteins (From Topology)T: alpha-helical domain in beta-lactamase/transpeptidase-like proteinsF: Peptidase_S11_1stECOD (1.6)
APeptidase_S11_2nde4k91A3 A: a+b three layersX: Profilin-likeH: a+b domain in beta-lactamase/transpeptidase-like proteins (From Topology)T: a+b domain in beta-lactamase/transpeptidase-like proteinsF: Peptidase_S11_2ndECOD (1.6)
BPBP5_Ce4k91B1 A: beta sandwichesX: Penicillin-binding protein associated domain (From Topology)H: Penicillin-binding protein associated domain (From Topology)T: Penicillin-binding protein associated domainF: PBP5_CECOD (1.6)
BPeptidase_S11_1ste4k91B2 A: alpha complex topologyX: alpha-helical domain in beta-lactamase/transpeptidase-like proteins (From Topology)H: alpha-helical domain in beta-lactamase/transpeptidase-like proteins (From Topology)T: alpha-helical domain in beta-lactamase/transpeptidase-like proteinsF: Peptidase_S11_1stECOD (1.6)
BPeptidase_S11_2nde4k91B3 A: a+b three layersX: Profilin-likeH: a+b domain in beta-lactamase/transpeptidase-like proteins (From Topology)T: a+b domain in beta-lactamase/transpeptidase-like proteinsF: Peptidase_S11_2ndECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00768D-alanyl-D-alanine carboxypeptidase (Peptidase_S11)D-alanyl-D-alanine carboxypeptidase- Domain
A, B
PF07943Penicillin-binding protein 5, C-terminal domain (PBP5_C)Penicillin-binding protein 5, C-terminal domainPenicillin-binding protein 5 expressed by E. coli (Swiss:P04287) functions as a D-alanyl-D-alanine carboxypeptidase. It is composed of two domains that are oriented at approximately right angles to each other. The N-terminal domain (Pfam:PF00768) is ...Penicillin-binding protein 5 expressed by E. coli (Swiss:P04287) functions as a D-alanyl-D-alanine carboxypeptidase. It is composed of two domains that are oriented at approximately right angles to each other. The N-terminal domain (Pfam:PF00768) is the catalytic domain. The C-terminal domain featured in this family is organised into a sandwich of two anti-parallel beta-sheets, and has a relatively hydrophobic surface as compared to the N-terminal domain. Its precise function is unknown; it may mediate interactions with other cell wall-synthesising enzymes, thus allowing the protein to be recruited to areas of active cell wall synthesis. It may also function as a linker domain that positions the active site in the catalytic domain closer to the peptidoglycan layer, to allow it to interact with cell wall peptides [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
D-ala-D-ala-carboxypeptidase -