4FT4
crystal structure of Zea mays ZMET2 in complex H3(1-32)K9me2 peptide and SAH
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | PF00145 | e4ft4B1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: PF00145 | ECOD (1.6) |
B [auth A] | PF00145 | e4ft4A1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: PF00145 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth B] | 2.30.30.490 | Mainly Beta | Roll | SH3 type barrels. | Bromo adjacent homology (BAH) domain | CATH (4.3.0) |
A [auth B] | 3.40.50.150 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Vaccinia Virus protein VP39 | CATH (4.3.0) |
A [auth B] | 3.90.120.10 | Alpha Beta | Alpha-Beta Complex | DNA Methylase | Chain A, domain 2 | CATH (4.3.0) |
B [auth A] | 2.30.30.490 | Mainly Beta | Roll | SH3 type barrels. | Bromo adjacent homology (BAH) domain | CATH (4.3.0) |
B [auth A] | 3.40.50.150 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Vaccinia Virus protein VP39 | CATH (4.3.0) |
B [auth A] | 3.90.120.10 | Alpha Beta | Alpha-Beta Complex | DNA Methylase | Chain A, domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A] | PF00385 | Chromo (CHRromatin Organisation MOdifier) domain (Chromo) | Chromo (CHRromatin Organisation MOdifier) domain | - | Domain |
A [auth B], B [auth A] | PF00145 | C-5 cytosine-specific DNA methylase (DNA_methylase) | C-5 cytosine-specific DNA methylase | - | Domain |
C [auth P], D [auth Q] | PF00125 | Core histone H2A/H2B/H3/H4 (Histone) | Core histone H2A/H2B/H3/H4 | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth A] | IPR000953 | Chromo/chromo shadow domain | Domain |
A [auth B], B [auth A] | IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Homologous Superfamily |
A [auth B], B [auth A] | IPR023780 | Chromo domain | Domain |
A [auth B], B [auth A] | IPR043151 | Bromo adjacent homology (BAH) domain superfamily | Homologous Superfamily |
A [auth B], B [auth A] | IPR016197 | Chromo-like domain superfamily | Homologous Superfamily |
A [auth B], B [auth A] | IPR001025 | Bromo adjacent homology (BAH) domain | Domain |
A [auth B], B [auth A] | IPR018117 | DNA methylase, C-5 cytosine-specific, active site | Active Site |
A [auth B], B [auth A] | IPR001525 | C-5 cytosine methyltransferase | Family |
C [auth P], D [auth Q] | IPR009072 | Histone-fold | Homologous Superfamily |
C [auth P], D [auth Q] | IPR007125 | Histone H2A/H2B/H3 | Domain |
C [auth P], D [auth Q] | IPR000164 | Histone H3/CENP-A | Family |
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
C [auth P], D [auth Q] | MLY | Parent Component: LYS :  AA0075 :  N6,N6-dimethyl-L-lysine MOD:00084 |