4C0K
Crystal structure of Drosophila Miro EF hand and cGTPase domains bound to one calcium ion (Ca-MiroS)
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF08355 | e4c0kA1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: PF08355 | ECOD (1.6) |
A | PF08356 | e4c0kA3 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: PF08356 | ECOD (1.6) |
A | PF00071 | e4c0kA2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00071 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.238.10 | Mainly Alpha | Orthogonal Bundle | Recoverin | domain 1 | CATH (4.3.0) |
A | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08355 | EF hand associated (EF_assoc_1) | EF hand associated | - | Family | |
PF08356 | EF hand associated (EF_assoc_2) | EF hand associated | - | Family | |
PF00071 | Ras family (Ras) | Ras family | Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motil ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR020860 | MIRO domain | Domain | |
IPR013567 | EF hand associated, type-2 | Domain | |
IPR003578 | Small GTPase Rho | Family | |
IPR021181 | Mitochondrial Rho GTPase | Family | |
IPR013566 | Mitochondrial Rho GTPase 1/3, EF hand associated, type-1 | Domain | |
IPR002048 | EF-hand domain | Domain | |
IPR011992 | EF-hand domain pair | Homologous Superfamily | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR001806 | Small GTPase | Family | |
IPR018247 | EF-Hand 1, calcium-binding site | Binding Site |