4A1R

The Structure of Serratia marcescens Lip, a membrane bound component of the Type VI Secretion System.

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Type VI secretion lipoproteins	8052058	3002089	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Type VI secretion lipoproteins	8052058	3002089	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Type VI secretion lipoproteins	8052058	3002089	SCOP2B (2022-06-29)
D	SCOP2 Family	T6SS-like	8047929	4005882	SCOP2 (2022-06-29)
D	SCOP2 Superfamily	Type VI secretion lipoproteins	8052058	3002089	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF12790	e4a1rA1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Prealbumin-like	F: PF12790	ECOD (1.6)
B	PF12790	e4a1rB1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Prealbumin-like	F: PF12790	ECOD (1.6)
C	PF12790	e4a1rC1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Prealbumin-like	F: PF12790	ECOD (1.6)
D	PF12790	e4a1rD1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Prealbumin-like	F: PF12790	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.40.4150	Mainly Beta	Sandwich	Immunoglobulin-like	Type VI secretion system, lipoprotein SciN	CATH (4.3.0)
B	2.60.40.4150	Mainly Beta	Sandwich	Immunoglobulin-like	Type VI secretion system, lipoprotein SciN	CATH (4.3.0)
C	2.60.40.4150	Mainly Beta	Sandwich	Immunoglobulin-like	Type VI secretion system, lipoprotein SciN	CATH (4.3.0)
D	2.60.40.4150	Mainly Beta	Sandwich	Immunoglobulin-like	Type VI secretion system, lipoprotein SciN	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF12790	Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 (T6SS-SciN)	Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR017734	Type VI secretion system, lipoprotein SciN	Family
A, B, C, D	IPR038706	Type VI secretion protein SciN-like superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.