3ZTE

Crystal Structure of the TRP RNA-Binding Attenuation Protein (TRAP) from Bacillus Licheniformis.

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d3ztea_	All beta proteins	Double-stranded beta-helix	TRAP-like	Trp RNA-binding attenuation protein (TRAP)	automated matches	(Bacillus licheniformis ) [TaxId: 1402 ],	SCOPe (2.08)
B	d3zteb_	All beta proteins	Double-stranded beta-helix	TRAP-like	Trp RNA-binding attenuation protein (TRAP)	automated matches	(Bacillus licheniformis ) [TaxId: 1402 ],	SCOPe (2.08)
C	d3ztec_	All beta proteins	Double-stranded beta-helix	TRAP-like	Trp RNA-binding attenuation protein (TRAP)	automated matches	(Bacillus licheniformis ) [TaxId: 1402 ],	SCOPe (2.08)
D	d3zted_	All beta proteins	Double-stranded beta-helix	TRAP-like	Trp RNA-binding attenuation protein (TRAP)	automated matches	(Bacillus licheniformis ) [TaxId: 1402 ],	SCOPe (2.08)
E	d3ztee_	All beta proteins	Double-stranded beta-helix	TRAP-like	Trp RNA-binding attenuation protein (TRAP)	automated matches	(Bacillus licheniformis ) [TaxId: 1402 ],	SCOPe (2.08)
F	d3ztef_	All beta proteins	Double-stranded beta-helix	TRAP-like	Trp RNA-binding attenuation protein (TRAP)	automated matches	(Bacillus licheniformis ) [TaxId: 1402 ],	SCOPe (2.08)
G	d3zteg_	All beta proteins	Double-stranded beta-helix	TRAP-like	Trp RNA-binding attenuation protein (TRAP)	automated matches	(Bacillus licheniformis ) [TaxId: 1402 ],	SCOPe (2.08)
H	d3zteh_	All beta proteins	Double-stranded beta-helix	TRAP-like	Trp RNA-binding attenuation protein (TRAP)	automated matches	(Bacillus licheniformis ) [TaxId: 1402 ],	SCOPe (2.08)
I	d3ztei_	All beta proteins	Double-stranded beta-helix	TRAP-like	Trp RNA-binding attenuation protein (TRAP)	automated matches	(Bacillus licheniformis ) [TaxId: 1402 ],	SCOPe (2.08)
J	d3ztej_	All beta proteins	Double-stranded beta-helix	TRAP-like	Trp RNA-binding attenuation protein (TRAP)	automated matches	(Bacillus licheniformis ) [TaxId: 1402 ],	SCOPe (2.08)
K	d3ztek_	All beta proteins	Double-stranded beta-helix	TRAP-like	Trp RNA-binding attenuation protein (TRAP)	automated matches	(Bacillus licheniformis ) [TaxId: 1402 ],	SCOPe (2.08)
L	d3ztel_	All beta proteins	Double-stranded beta-helix	TRAP-like	Trp RNA-binding attenuation protein (TRAP)	automated matches	(Bacillus licheniformis ) [TaxId: 1402 ],	SCOPe (2.08)
M	d3ztem_	All beta proteins	Double-stranded beta-helix	TRAP-like	Trp RNA-binding attenuation protein (TRAP)	automated matches	(Bacillus licheniformis ) [TaxId: 1402 ],	SCOPe (2.08)
N	d3zten_	All beta proteins	Double-stranded beta-helix	TRAP-like	Trp RNA-binding attenuation protein (TRAP)	automated matches	(Bacillus licheniformis ) [TaxId: 1402 ],	SCOPe (2.08)
O	d3zteo_	All beta proteins	Double-stranded beta-helix	TRAP-like	Trp RNA-binding attenuation protein (TRAP)	automated matches	(Bacillus licheniformis ) [TaxId: 1402 ],	SCOPe (2.08)
P	d3ztep_	All beta proteins	Double-stranded beta-helix	TRAP-like	Trp RNA-binding attenuation protein (TRAP)	automated matches	(Bacillus licheniformis ) [TaxId: 1402 ],	SCOPe (2.08)
Q	d3zteq_	All beta proteins	Double-stranded beta-helix	TRAP-like	Trp RNA-binding attenuation protein (TRAP)	automated matches	(Bacillus licheniformis ) [TaxId: 1402 ],	SCOPe (2.08)
R	d3zter_	All beta proteins	Double-stranded beta-helix	TRAP-like	Trp RNA-binding attenuation protein (TRAP)	automated matches	(Bacillus licheniformis ) [TaxId: 1402 ],	SCOPe (2.08)
S	d3ztes_	All beta proteins	Double-stranded beta-helix	TRAP-like	Trp RNA-binding attenuation protein (TRAP)	automated matches	(Bacillus licheniformis ) [TaxId: 1402 ],	SCOPe (2.08)
T	d3ztet_	All beta proteins	Double-stranded beta-helix	TRAP-like	Trp RNA-binding attenuation protein (TRAP)	automated matches	(Bacillus licheniformis ) [TaxId: 1402 ],	SCOPe (2.08)
U	d3zteu_	All beta proteins	Double-stranded beta-helix	TRAP-like	Trp RNA-binding attenuation protein (TRAP)	automated matches	(Bacillus licheniformis ) [TaxId: 1402 ],	SCOPe (2.08)
V	d3ztev_	All beta proteins	Double-stranded beta-helix	TRAP-like	Trp RNA-binding attenuation protein (TRAP)	automated matches	(Bacillus licheniformis ) [TaxId: 1402 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	TRAP-like	8078219	3001865	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	TRAP-like	8078219	3001865	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	TRAP-like	8078219	3001865	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	TRAP-like	8078219	3001865	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	TRAP-like	8078219	3001865	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	TRAP-like	8078219	3001865	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	TRAP-like	8078219	3001865	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	TRAP-like	8078219	3001865	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	TRAP-like	8078219	3001865	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	TRAP-like	8078219	3001865	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	TRAP-like	8078219	3001865	SCOP2B (2022-06-29)
L	SCOP2 Family	Trp RNA-binding attenuation protein (TRAP)	8078218	4002896	SCOP2 (2022-06-29)
L	SCOP2 Superfamily	TRAP-like	8078219	3001865	SCOP2 (2022-06-29)
M	SCOP2B Superfamily	TRAP-like	8078219	3001865	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	TRAP-like	8078219	3001865	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	TRAP-like	8078219	3001865	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	TRAP-like	8078219	3001865	SCOP2B (2022-06-29)
Q	SCOP2B Superfamily	TRAP-like	8078219	3001865	SCOP2B (2022-06-29)
R	SCOP2B Superfamily	TRAP-like	8078219	3001865	SCOP2B (2022-06-29)
S	SCOP2B Superfamily	TRAP-like	8078219	3001865	SCOP2B (2022-06-29)
T	SCOP2B Superfamily	TRAP-like	8078219	3001865	SCOP2B (2022-06-29)
U	SCOP2B Superfamily	TRAP-like	8078219	3001865	SCOP2B (2022-06-29)
V	SCOP2B Superfamily	TRAP-like	8078219	3001865	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF02081	e3zteA1	A: beta sandwiches	X: jelly-roll	H: Trp RNA-binding attenuation protein (TRAP) (From Topology)	T: Trp RNA-binding attenuation protein (TRAP)	F: PF02081	ECOD (1.6)
B	PF02081	e3zteB1	A: beta sandwiches	X: jelly-roll	H: Trp RNA-binding attenuation protein (TRAP) (From Topology)	T: Trp RNA-binding attenuation protein (TRAP)	F: PF02081	ECOD (1.6)
C	PF02081	e3zteC1	A: beta sandwiches	X: jelly-roll	H: Trp RNA-binding attenuation protein (TRAP) (From Topology)	T: Trp RNA-binding attenuation protein (TRAP)	F: PF02081	ECOD (1.6)
D	PF02081	e3zteD1	A: beta sandwiches	X: jelly-roll	H: Trp RNA-binding attenuation protein (TRAP) (From Topology)	T: Trp RNA-binding attenuation protein (TRAP)	F: PF02081	ECOD (1.6)
E	PF02081	e3zteE1	A: beta sandwiches	X: jelly-roll	H: Trp RNA-binding attenuation protein (TRAP) (From Topology)	T: Trp RNA-binding attenuation protein (TRAP)	F: PF02081	ECOD (1.6)
F	PF02081	e3zteF1	A: beta sandwiches	X: jelly-roll	H: Trp RNA-binding attenuation protein (TRAP) (From Topology)	T: Trp RNA-binding attenuation protein (TRAP)	F: PF02081	ECOD (1.6)
G	PF02081	e3zteG1	A: beta sandwiches	X: jelly-roll	H: Trp RNA-binding attenuation protein (TRAP) (From Topology)	T: Trp RNA-binding attenuation protein (TRAP)	F: PF02081	ECOD (1.6)
H	PF02081	e3zteH1	A: beta sandwiches	X: jelly-roll	H: Trp RNA-binding attenuation protein (TRAP) (From Topology)	T: Trp RNA-binding attenuation protein (TRAP)	F: PF02081	ECOD (1.6)
I	PF02081	e3zteI1	A: beta sandwiches	X: jelly-roll	H: Trp RNA-binding attenuation protein (TRAP) (From Topology)	T: Trp RNA-binding attenuation protein (TRAP)	F: PF02081	ECOD (1.6)
J	PF02081	e3zteJ1	A: beta sandwiches	X: jelly-roll	H: Trp RNA-binding attenuation protein (TRAP) (From Topology)	T: Trp RNA-binding attenuation protein (TRAP)	F: PF02081	ECOD (1.6)
K	PF02081	e3zteK1	A: beta sandwiches	X: jelly-roll	H: Trp RNA-binding attenuation protein (TRAP) (From Topology)	T: Trp RNA-binding attenuation protein (TRAP)	F: PF02081	ECOD (1.6)
L	PF02081	e3zteL1	A: beta sandwiches	X: jelly-roll	H: Trp RNA-binding attenuation protein (TRAP) (From Topology)	T: Trp RNA-binding attenuation protein (TRAP)	F: PF02081	ECOD (1.6)
M	PF02081	e3zteM1	A: beta sandwiches	X: jelly-roll	H: Trp RNA-binding attenuation protein (TRAP) (From Topology)	T: Trp RNA-binding attenuation protein (TRAP)	F: PF02081	ECOD (1.6)
N	PF02081	e3zteN1	A: beta sandwiches	X: jelly-roll	H: Trp RNA-binding attenuation protein (TRAP) (From Topology)	T: Trp RNA-binding attenuation protein (TRAP)	F: PF02081	ECOD (1.6)
O	PF02081	e3zteO1	A: beta sandwiches	X: jelly-roll	H: Trp RNA-binding attenuation protein (TRAP) (From Topology)	T: Trp RNA-binding attenuation protein (TRAP)	F: PF02081	ECOD (1.6)
P	PF02081	e3zteP1	A: beta sandwiches	X: jelly-roll	H: Trp RNA-binding attenuation protein (TRAP) (From Topology)	T: Trp RNA-binding attenuation protein (TRAP)	F: PF02081	ECOD (1.6)
Q	PF02081	e3zteQ1	A: beta sandwiches	X: jelly-roll	H: Trp RNA-binding attenuation protein (TRAP) (From Topology)	T: Trp RNA-binding attenuation protein (TRAP)	F: PF02081	ECOD (1.6)
R	PF02081	e3zteR1	A: beta sandwiches	X: jelly-roll	H: Trp RNA-binding attenuation protein (TRAP) (From Topology)	T: Trp RNA-binding attenuation protein (TRAP)	F: PF02081	ECOD (1.6)
S	PF02081	e3zteS1	A: beta sandwiches	X: jelly-roll	H: Trp RNA-binding attenuation protein (TRAP) (From Topology)	T: Trp RNA-binding attenuation protein (TRAP)	F: PF02081	ECOD (1.6)
T	PF02081	e3zteT1	A: beta sandwiches	X: jelly-roll	H: Trp RNA-binding attenuation protein (TRAP) (From Topology)	T: Trp RNA-binding attenuation protein (TRAP)	F: PF02081	ECOD (1.6)
U	PF02081	e3zteU1	A: beta sandwiches	X: jelly-roll	H: Trp RNA-binding attenuation protein (TRAP) (From Topology)	T: Trp RNA-binding attenuation protein (TRAP)	F: PF02081	ECOD (1.6)
V	PF02081	e3zteV1	A: beta sandwiches	X: jelly-roll	H: Trp RNA-binding attenuation protein (TRAP) (From Topology)	T: Trp RNA-binding attenuation protein (TRAP)	F: PF02081	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.40.50	Mainly Beta	Sandwich	Immunoglobulin-like	TRAP-like	CATH (4.3.0)
B	2.60.40.50	Mainly Beta	Sandwich	Immunoglobulin-like	TRAP-like	CATH (4.3.0)
C	2.60.40.50	Mainly Beta	Sandwich	Immunoglobulin-like	TRAP-like	CATH (4.3.0)
D	2.60.40.50	Mainly Beta	Sandwich	Immunoglobulin-like	TRAP-like	CATH (4.3.0)
E	2.60.40.50	Mainly Beta	Sandwich	Immunoglobulin-like	TRAP-like	CATH (4.3.0)
F	2.60.40.50	Mainly Beta	Sandwich	Immunoglobulin-like	TRAP-like	CATH (4.3.0)
G	2.60.40.50	Mainly Beta	Sandwich	Immunoglobulin-like	TRAP-like	CATH (4.3.0)
H	2.60.40.50	Mainly Beta	Sandwich	Immunoglobulin-like	TRAP-like	CATH (4.3.0)
I	2.60.40.50	Mainly Beta	Sandwich	Immunoglobulin-like	TRAP-like	CATH (4.3.0)
J	2.60.40.50	Mainly Beta	Sandwich	Immunoglobulin-like	TRAP-like	CATH (4.3.0)
K	2.60.40.50	Mainly Beta	Sandwich	Immunoglobulin-like	TRAP-like	CATH (4.3.0)
L	2.60.40.50	Mainly Beta	Sandwich	Immunoglobulin-like	TRAP-like	CATH (4.3.0)
M	2.60.40.50	Mainly Beta	Sandwich	Immunoglobulin-like	TRAP-like	CATH (4.3.0)
N	2.60.40.50	Mainly Beta	Sandwich	Immunoglobulin-like	TRAP-like	CATH (4.3.0)
O	2.60.40.50	Mainly Beta	Sandwich	Immunoglobulin-like	TRAP-like	CATH (4.3.0)
P	2.60.40.50	Mainly Beta	Sandwich	Immunoglobulin-like	TRAP-like	CATH (4.3.0)
Q	2.60.40.50	Mainly Beta	Sandwich	Immunoglobulin-like	TRAP-like	CATH (4.3.0)
R	2.60.40.50	Mainly Beta	Sandwich	Immunoglobulin-like	TRAP-like	CATH (4.3.0)
S	2.60.40.50	Mainly Beta	Sandwich	Immunoglobulin-like	TRAP-like	CATH (4.3.0)
T	2.60.40.50	Mainly Beta	Sandwich	Immunoglobulin-like	TRAP-like	CATH (4.3.0)
U	2.60.40.50	Mainly Beta	Sandwich	Immunoglobulin-like	TRAP-like	CATH (4.3.0)
V	2.60.40.50	Mainly Beta	Sandwich	Immunoglobulin-like	TRAP-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V	PF02081	Tryptophan RNA-binding attenuator protein (TrpBP)	Tryptophan RNA-binding attenuator protein	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V	TRYPTOPHAN OPERON RNA-BINDING ATTENUATION PROTEIN (TRAP)	RNA binding binding organic cyclic compound binding nucleic acid binding	cellular biosynthetic process cellular metabolic process RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression DNA-templated transcription termination macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription organic cyclic compound metabolic process nucleic acid biosynthetic process organic substance metabolic process cellular biosynthetic process cellular metabolic process RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression DNA-templated transcription termination macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription organic cyclic compound metabolic process nucleic acid biosynthetic process organic substance metabolic process biosynthetic process organic cyclic compound biosynthetic process organic substance biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of cellular process regulation of primary metabolic process regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation regulation of cellular metabolic process regulation of macromolecule metabolic process regulation of cellular biosynthetic process regulation of gene expression regulation of macromolecule biosynthetic process regulation of DNA-templated transcription regulation of metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V	IPR016031	Tryptophan RNA-binding attenuator protein-like domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V	IPR000824	Transcription attenuation protein MtrB	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V	IPR023558	Tryptophan RNA-binding attenuator protein domain	Domain

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3ZTE

Crystal Structure of the TRP RNA-Binding Attenuation Protein (TRAP) from Bacillus Licheniformis.

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Domain Annotation: ECOD Classification ECOD Database Homepage

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage