Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyNab2-type CCCH zinc finger8050279 4006827 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyCCCH zinc finger-like8051785 3001741 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyCCCH zinc finger-like8051786 3001741 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF14608e3zj2A1 A: few secondary structure elementsX: CCCH zinc fingerH: CCCH zinc finger (From Topology)T: CCCH zinc fingerF: PF14608ECOD (1.6)
APF21803e3zj2A2 A: few secondary structure elementsX: CCCH zinc fingerH: CCCH zinc finger (From Topology)T: CCCH zinc fingerF: PF21803ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A4.10.1000.40 Few Secondary Structures Irregular CCCH zinc finger CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF14608RNA-binding, Nab2-type zinc finger (zf-CCCH_2)RNA-binding, Nab2-type zinc fingerThis is an unusual zinc-finger family, and is represented by fingers 5-7 of Nab2. Nab2 ZnF5-7 are zinc-fingers of the type C-x8-C-x5-C-x3-H. Nab2 ZnFs function in the generation of export-competent mRNPs. Mab2 is a conserved polyadenosine-RNA-binding ...This is an unusual zinc-finger family, and is represented by fingers 5-7 of Nab2. Nab2 ZnF5-7 are zinc-fingers of the type C-x8-C-x5-C-x3-H. Nab2 ZnFs function in the generation of export-competent mRNPs. Mab2 is a conserved polyadenosine-RNA-binding Zn finger protein required for both mRNA export and polyadenylation regulation and becomes attached to the mRNP after splicing and during or immediately after polyadenylation. The three ZnFs, 5-7, have almost identical folds and, most unusually, associate with one another to form a single coherent structural unit. ZnF5-7 bind to eight consecutive adenines, and chemical shift perturbations identify residues on each finger that interact with RNA [1].
Domain
PF21803Nab2-type CCCH zinc finger 4 (Nab2-zf4)Nab2-type CCCH zinc finger 4Poly(A)-binding proteins (PABPs) protect against nuclease activity and are co-transcriptionally recruited to the nascent poly(A) tail. Nab2 belongs to one of the three major families of PABPs. It contains seven CCCH-type zinc fingers (zf1-7) that are ...Poly(A)-binding proteins (PABPs) protect against nuclease activity and are co-transcriptionally recruited to the nascent poly(A) tail. Nab2 belongs to one of the three major families of PABPs. It contains seven CCCH-type zinc fingers (zf1-7) that are found in three structurally independent tandems, Nab2p zf1-2, Nab2p zf3-4 and Nab2p zf5-7. This entry was build using Nab2p zf4 that doesn't participate in RNA binding [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
NUCLEAR POLYADENYLATED RNA-BINDING PROTEIN NAB2