3VTO
The crystal structure of the C-terminal domain of Mu phage central spike
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Phage fibre proteins | 8095957 | 3000351 | SCOP2B (2022-06-29) |
B | SCOP2 Family | Membrane-piercing spike-like | 8079914 | 4005039 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Phage fibre proteins | 8095957 | 3000351 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | Phage fibre proteins | 8095957 | 3000351 | SCOP2B (2022-06-29) |
D [auth P] | SCOP2B Superfamily | Phage fibre proteins | 8095957 | 3000351 | SCOP2B (2022-06-29) |
E [auth Q] | SCOP2B Superfamily | Phage fibre proteins | 8095957 | 3000351 | SCOP2B (2022-06-29) |
F [auth R] | SCOP2B Superfamily | Phage fibre proteins | 8095957 | 3000351 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e3vtoA1 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: F_UNCLASSIFIED | ECOD (1.6) |
B | F_UNCLASSIFIED | e3vtoB1 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: F_UNCLASSIFIED | ECOD (1.6) |
C | F_UNCLASSIFIED | e3vtoC1 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: F_UNCLASSIFIED | ECOD (1.6) |
D [auth P] | F_UNCLASSIFIED | e3vtoP1 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: F_UNCLASSIFIED | ECOD (1.6) |
E [auth Q] | F_UNCLASSIFIED | e3vtoQ1 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: F_UNCLASSIFIED | ECOD (1.6) |
F [auth R] | F_UNCLASSIFIED | e3vtoR1 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: F_UNCLASSIFIED | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
E [auth Q] | 6.20.170.10 | Special | Other non-globular | heat- and protease-stable fragment of the bacteriophage t4 short fibre, domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF06890 | Bacteriophage Mu Gp45 spike protein (Phage_Mu_Gp45) | Bacteriophage Mu Gp45 spike protein | This family consists of Bacteriophage Mu Gp45 related proteins from both phages and bacteria. This protein forms the spike which punctures the cell membrane. | Domain | |
PF18715 | Phage spike trimer (Phage_spike) | Phage spike trimer | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR014462 | Phage-associated protein Gp45 | Family | |
IPR013046 | Phage baseplate assembly protein V/Gp45 | Family | |
IPR040629 | Phage spike trimer | Domain |