3V17
Crystal structure of the Fe(II)/alpha-ketoglutarate dependent taurine dioxygenase from Pseudomonas putida KT2440
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3v17a_ | All beta proteins | Double-stranded beta-helix | Clavaminate synthase-like | TauD/TfdA-like | automated matches | (Pseudomonas putida KT2440 ) [TaxId: 160488 ], | SCOPe (2.08) |
C [auth B] | d3v17b_ | All beta proteins | Double-stranded beta-helix | Clavaminate synthase-like | TauD/TfdA-like | automated matches | (Pseudomonas putida KT2440 ) [TaxId: 160488 ], | SCOPe (2.08) |
D | d3v17d_ | All beta proteins | Double-stranded beta-helix | Clavaminate synthase-like | TauD/TfdA-like | automated matches | (Pseudomonas putida KT2440 ) [TaxId: 160488 ], | SCOPe (2.08) |
B [auth C] | d3v17c_ | All beta proteins | Double-stranded beta-helix | Clavaminate synthase-like | TauD/TfdA-like | automated matches | (Pseudomonas putida KT2440 ) [TaxId: 160488 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Clavaminate synthase-like | 8080564 | 3001848 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | Clavaminate synthase-like | 8080564 | 3001848 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Clavaminate synthase-like | 8080564 | 3001848 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | Clavaminate synthase-like | 8080564 | 3001848 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF02668 | e3v17A1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: PF02668 | ECOD (1.6) |
C [auth B] | PF02668 | e3v17B1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: PF02668 | ECOD (1.6) |
D | PF02668 | e3v17D1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: PF02668 | ECOD (1.6) |
B [auth C] | PF02668 | e3v17C1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: PF02668 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.60.130.10 | Alpha Beta | 4-Layer Sandwich | Double-stranded beta-helix | Clavaminate synthase-like | CATH (4.3.0) |
C [auth B] | 3.60.130.10 | Alpha Beta | 4-Layer Sandwich | Double-stranded beta-helix | Clavaminate synthase-like | CATH (4.3.0) |
D | 3.60.130.10 | Alpha Beta | 4-Layer Sandwich | Double-stranded beta-helix | Clavaminate synthase-like | CATH (4.3.0) |
B [auth C] | 3.60.130.10 | Alpha Beta | 4-Layer Sandwich | Double-stranded beta-helix | Clavaminate synthase-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B [auth C], C [auth B], D | PF02668 | Taurine catabolism dioxygenase TauD, TfdA family (TauD) | Taurine catabolism dioxygenase TauD, TfdA family | This family consists of taurine catabolism dioxygenases of the TauD, TfdA family. TauD from E. coli Swiss:P37610 is a alpha-ketoglutarate-dependent taurine dioxygenase [1]. This enzyme catalyses the oxygenolytic release of sulfite from taurine [1]. ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B [auth C], C [auth B], D | IPR003819 | TauD/TfdA-like domain | Domain |
A, B [auth C], C [auth B], D | IPR042098 | Taurine dioxygenase TauD-like superfamily | Homologous Superfamily |
A, B [auth C], C [auth B], D | IPR006189 | CHASE domain | Domain |