Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilySwaposin8099775 4001057 SCOP2 (2022-06-29)
ASCOP2 SuperfamilySaposin8099776 3000601 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ASapB_1e3rfiA1 A: alpha arraysX: Saposin-likeH: Saposin-like (From Topology)T: Saposin-likeF: SapB_1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.225.10 Mainly Alpha Orthogonal Bundle NK-Lysin Saposin-likeCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF05184Saposin-like type B, region 1 (SapB_1)Saposin-like type B, region 1Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH sta ...Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity [1,2]. It is one of the most studied members of the saposin protein family and it is involved in the hydrolysis of glycolipids and glycerolipids. SapB is unique in the saposin family in that it facilitates degradation by interacting with the substrate, not the enzymes [3].
Domain
PF03489Saposin-like type B, region 2 (SapB_2)Saposin-like type B, region 2- Family
PF00026Eukaryotic aspartyl protease (Asp)Eukaryotic aspartyl protease- Family

Membrane Protein Annotation: OPM OPM Database Homepage