3QDH
Crystal structure of Actinomyces fimbrial adhesin FimA
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Gram-positive pilin BB domain-like | 8045767 | 4004692 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Gram-positive pilin backbone D3 domain-like | 8048173 | 4004691 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Bacterial adhesin-like | 8092054 | 3000723 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Cna B-type domain-like | 8092055 | 3000862 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF17802 | e3qdhA6 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: PF17802 | ECOD (1.6) |
A | PF20623 | e3qdhA5 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF20623 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.740 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00746 | LPXTG cell wall anchor motif (Gram_pos_anchor) | LPXTG cell wall anchor motif | - | Motif | |
PF20623 | Sgo0707 N2 domain (Sgo0707_N2) | Sgo0707 N2 domain | This domain represents the N2 domain found in the Sgo0707 adhesin protein [1]. This domain is closely related to Pfam:PF16569. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Fimbrial structural subunit |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR026466 | Fimbrial isopeptide formation D2 domain | Domain | |
IPR046473 | Sgo0707-like, N2 domain | Domain | |
IPR048052 | Fimbrial subunit type 1-like | Family | |
IPR032364 | Gram-positive pilin subunit D1, N-terminal | Domain | |
IPR019931 | LPXTG cell wall anchor domain | Domain |