Annotations: 3N89

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF17905	e3n89A4	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: KH-domains	T: Eukaryotic type KH-domain (KH-domain type I)	F: PF17905	ECOD (1.6)
A	PF21482	e3n89A2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: KH-domains	T: Eukaryotic type KH-domain (KH-domain type I)	F: PF21482	ECOD (1.6)
A	PF22467	e3n89A3	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: KH-domains	T: Eukaryotic type KH-domain (KH-domain type I)	F: PF22467	ECOD (1.6)
A	PF22801	e3n89A1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: KH-domains	T: Eukaryotic type KH-domain (KH-domain type I)	F: PF22801	ECOD (1.6)
B	PF17905,PF22467	e3n89B3	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: KH-domains	T: Eukaryotic type KH-domain (KH-domain type I)	F: PF17905,PF22467	ECOD (1.6)
B	PF21482	e3n89B2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: KH-domains	T: Eukaryotic type KH-domain (KH-domain type I)	F: PF21482	ECOD (1.6)
B	PF22467	e3n89B4	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: KH-domains	T: Eukaryotic type KH-domain (KH-domain type I)	F: PF22467	ECOD (1.6)
B	PF22801	e3n89B1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: KH-domains	T: Eukaryotic type KH-domain (KH-domain type I)	F: PF22801	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.310.270	Alpha Beta	2-Layer Sandwich	TATA-Binding Protein		CATH (4.3.0)
A	3.30.310.210	Alpha Beta	2-Layer Sandwich	TATA-Binding Protein		CATH (4.3.0)
B	3.30.310.270	Alpha Beta	2-Layer Sandwich	TATA-Binding Protein		CATH (4.3.0)
B	3.30.310.210	Alpha Beta	2-Layer Sandwich	TATA-Binding Protein		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF17905	GLD-3 KH domain 5 (KH_10)	GLD-3 KH domain 5	This entry corresponds to KH5 of the GLD-3 protein Swiss:Q95ZK7 [1]. The 4 KH domains KH2 to KH5 form a proteolytically stable structure.	Domain
A, B	PF21482	GLD-3, KH3 domain (GLD3_KH3)	GLD-3, KH3 domain	This is KH3 domain of Defective in germ line development protein 3 (GLD-3) from C. elegans, a protein required maternally for germline survival and embryogenesis [1]. This domain together with KH2, KH4 and KH5 are organized into a globular structural ...	This is KH3 domain of Defective in germ line development protein 3 (GLD-3) from C. elegans, a protein required maternally for germline survival and embryogenesis [1]. This domain together with KH2, KH4 and KH5 are organized into a globular structural unit.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Defective in germ line development protein 3, isoform a	protein binding binding protein domain specific binding RNA binding organic cyclic compound binding nucleic acid binding enzyme regulator activity enzyme activator activity molecular function activator activity molecular function regulator activity polynucleotide adenylyltransferase activator activity	developmental process multicellular organism development multicellular organismal process anatomical structure development nematode larval development larval development post-embryonic development spermatogenesis sexual reproduction reproductive process multicellular organismal reproductive process developmental process involved in reproduction male gamete generation gamete generation developmental process multicellular organism development multicellular organismal process anatomical structure development nematode larval development larval development post-embryonic development spermatogenesis sexual reproduction reproductive process multicellular organismal reproductive process developmental process involved in reproduction male gamete generation gamete generation nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process RNA metabolic process metabolic process primary metabolic process macromolecule metabolic process cytosolic mRNA polyadenylation mRNA metabolic process nucleic acid metabolic process cellular component organization nuclear division organelle organization organelle fission cellular process cellular component organization or biogenesis mitotic cell cycle process cytoskeleton-dependent cytokinesis mitotic cytokinesis cytokinesis cell division cell cycle mitotic cell cycle cell cycle process regulation of cellular process cellular biosynthetic process positive regulation of biological process positive regulation of cellular metabolic process positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process organic substance biosynthetic process positive regulation of macromolecule metabolic process positive regulation of cellular process regulation of biosynthetic process regulation of biological process cellular metabolic process biological regulation regulation of cellular metabolic process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of cellular biosynthetic process regulation of gene expression biosynthetic process positive regulation of gene expression regulation of macromolecule biosynthetic process regulation of metabolic process positive regulation of cellular biosynthetic process masculinization of hermaphroditic germ-line sex determination germ-line sex determination hermaphrodite germ-line sex determination organonitrogen compound biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression protein metabolic process organonitrogen compound metabolic process regulation of protein metabolic process translation regulation of translation mRNA processing RNA processing positive regulation of organelle organization regulation of cellular component organization positive regulation of cellular component organization regulation of mitotic nuclear division positive regulation of mitotic nuclear division regulation of mitotic cell cycle positive regulation of cell cycle process regulation of cell cycle mitotic nuclear division regulation of cell cycle process positive regulation of nuclear division regulation of organelle organization positive regulation of cell cycle regulation of nuclear division vulval development animal organ development cellular developmental process stem cell division cell development cellular process involved in reproduction in multicellular organism germ-line stem cell division cell differentiation germ cell development regulation of multicellular organism growth regulation of growth regulation of developmental growth regulation of developmental process developmental growth growth positive regulation of multicellular organism growth positive regulation of developmental process multicellular organism growth positive regulation of growth positive regulation of multicellular organismal process regulation of multicellular organismal process positive regulation of developmental growth regulation of reproductive process meiotic cell cycle process regulation of meiosis I meiosis I meiotic nuclear division positive regulation of reproductive process regulation of meiotic cell cycle meiotic cell cycle positive regulation of meiotic cell cycle regulation of meiotic nuclear division meiosis I cell cycle process positive regulation of meiosis I positive regulation of meiotic nuclear division embryo development ending in birth or egg hatching embryo development	intracellular anatomical structure P granule cytoplasmic ribonucleoprotein granule germ plasm cellular anatomical entity ribonucleoprotein granule intracellular organelle organelle pole plasm intracellular non-membrane-bounded organelle cytoplasm supramolecular complex non-membrane-bounded organelle transferase complex, transferring phosphorus-containing groups intracellular anatomical structure P granule cytoplasmic ribonucleoprotein granule germ plasm cellular anatomical entity ribonucleoprotein granule intracellular organelle organelle pole plasm intracellular non-membrane-bounded organelle cytoplasm supramolecular complex non-membrane-bounded organelle transferase complex, transferring phosphorus-containing groups protein-containing complex catalytic complex RNA polymerase complex RNA-directed RNA polymerase complex transferase complex intracellular protein-containing complex perinuclear region of cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR049309	Defective in germ line development protein 3, KH3 domain	Domain
A, B	IPR049310	Defective in germ line development protein 3, KH4 domain	Domain
A, B	IPR041194	Defective in germ line development protein 3-like, KH5 domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.