3LAZ

The crystal structure of the N-terminal domain of D-galactarate dehydratase from Escherichia coli CFT073

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF08666	e3lazA1	A: beta barrels	X: beta-clip	H: SET domain-like (From Topology)	T: SET domain-like	F: PF08666	ECOD (1.6)
B	PF08666	e3lazB1	A: beta barrels	X: beta-clip	H: SET domain-like (From Topology)	T: SET domain-like	F: PF08666	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.30.130.110	Mainly Beta	Roll	Archaeosine Trna-guanine Transglycosylase	Chain: A, domain 4	CATH (4.3.0)
B	2.30.130.110	Mainly Beta	Roll	Archaeosine Trna-guanine Transglycosylase	Chain: A, domain 4	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF08666	SAF domain (SAF)	SAF domain	This domain family includes a range of different proteins. Such as antifreeze proteins and flagellar FlgA proteins, and CpaB pilus proteins.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	D-galactarate dehydratase	hydro-lyase activity galactarate dehydratase activity lyase activity catalytic activity carbon-oxygen lyase activity cation binding transition metal ion binding iron ion binding ion binding binding ferrous iron binding metal ion binding small molecule binding identical protein binding hydro-lyase activity galactarate dehydratase activity lyase activity catalytic activity carbon-oxygen lyase activity cation binding transition metal ion binding iron ion binding ion binding binding ferrous iron binding metal ion binding small molecule binding identical protein binding protein binding protein homodimerization activity protein dimerization activity	galactarate catabolic process galactarate metabolic process catabolic process oxoacid metabolic process cellular metabolic process dicarboxylic acid metabolic process carboxylic acid metabolic process organic acid metabolic process dicarboxylic acid catabolic process organic acid catabolic process aldaric acid metabolic process cellular catabolic process organic substance metabolic process aldaric acid catabolic process carboxylic acid catabolic process galactarate catabolic process galactarate metabolic process catabolic process oxoacid metabolic process cellular metabolic process dicarboxylic acid metabolic process carboxylic acid metabolic process organic acid metabolic process dicarboxylic acid catabolic process organic acid catabolic process aldaric acid metabolic process cellular catabolic process organic substance metabolic process aldaric acid catabolic process carboxylic acid catabolic process small molecule metabolic process metabolic process cellular process small molecule catabolic process organic substance catabolic process monosaccharide metabolic process D-galacturonate catabolic process carbohydrate catabolic process monocarboxylic acid catabolic process D-galacturonate metabolic process galacturonate metabolic process carbohydrate metabolic process uronic acid metabolic process primary metabolic process monocarboxylic acid metabolic process monosaccharide catabolic process galacturonate catabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR032893	Galactarate dehydratase (L-threo-forming) GarD, Enterobacteriaceae	Family
A, B	IPR007392	D-galactarate/Altronate dehydratase, second domain	Domain
A, B	IPR048332	D-galactarate/Altronate dehydratase, C-terminal domain	Domain
A, B	IPR013974	SAF domain	Domain
A, B	IPR044144	UxaA/GarD, SAF domain	Domain
A, B	IPR017654	Galactarate dehydratase GarD-like	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.