3L82
X-ray Crystal structure of TRF1 and Fbx4 complex
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3l82a_ | All alpha proteins | Telomeric repeat binding factor (TRF) dimerisation domain | Telomeric repeat binding factor (TRF) dimerisation domain | Telomeric repeat binding factor (TRF) dimerisation domain | TRF1 | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Telomeric repeat binding factor (TRF) dimerisation domain | 8039441 | 3000229 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF08558 | e3l82A1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF08558 | ECOD (1.6) |
B | F_UNCLASSIFIED | e3l82B1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: F_UNCLASSIFIED | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.25.40.210 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Telomere repeat-binding factor, dimerisation domain | CATH (4.3.0) |
B | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08558 | Telomere repeat binding factor (TRF) (TRF) | Telomere repeat binding factor (TRF) | - | Repeat | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR017930 | Myb domain | Domain | |
IPR009057 | Homeobox-like domain superfamily | Homologous Superfamily | |
IPR013867 | Telomere repeat-binding factor, dimerisation domain | Domain | |
IPR036507 | Telomere repeat-binding factor, dimerisation domain superfamily | Homologous Superfamily | |
IPR017357 | Telomeric repeat-binding factor 1/2 | Family | |
IPR001005 | SANT/Myb domain | Domain | |
IPR001810 | F-box domain | Domain | |
IPR039588 | F-box only protein 4 | Family | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR036047 | F-box-like domain superfamily | Homologous Superfamily |