Annotations: 3K8P

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A [auth C]	SCOP2 Family	Dsl1-like	8047197	4005500	SCOP2 (2022-06-29)
A [auth C]	SCOP2 Superfamily	Cullin repeat-like	8052691	3000059	SCOP2 (2022-06-29)
B [auth D]	SCOP2 Family	Sec39-like	8050725	4007022	SCOP2 (2022-06-29)
B [auth D]	SCOP2 Superfamily	Sec39 repeat-like	8052703	3002137	SCOP2 (2022-06-29)
B [auth D]	SCOP2 Superfamily	Sec39 repeat-like	8052704	3002137	SCOP2 (2022-06-29)
B [auth D]	SCOP2 Superfamily	Sec39 repeat-like	8052705	3002137	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth C]	PF11989	e3k8pC1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: PF11989	ECOD (1.6)
B [auth D]	PF08314	e3k8pD1	A: alpha superhelices	X: Repetitive alpha hairpins	H: Protein transport protein SEC39 (From Topology)	T: Protein transport protein SEC39	F: PF08314	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A [auth C]	1.20.58.1440	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
A [auth C]	1.10.357.150	Mainly Alpha	Orthogonal Bundle	Tetracycline Repressor	domain 2	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth C]	PF11989	Retrograde transport protein Dsl1 C terminal (Dsl1_C)	Retrograde transport protein Dsl1 C terminal	-	Repeat
A [auth C]	PF11988	Retrograde transport protein Dsl1 N terminal (Dsl1_N)	Retrograde transport protein Dsl1 N terminal	-	Repeat
B [auth D]	PF08314	Secretory pathway protein Sec39 (Sec39)	Secretory pathway protein Sec39	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth C]	Dsl1	-	-	-
B [auth D]	Protein transport protein SEC39	-	localization transport cellular process establishment of localization vesicle-mediated transport retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum Golgi vesicle transport cellular component organization peroxisome organization organelle organization cellular component organization or biogenesis ER-dependent peroxisome organization protein localization establishment of protein localization localization transport cellular process establishment of localization vesicle-mediated transport retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum Golgi vesicle transport cellular component organization peroxisome organization organelle organization cellular component organization or biogenesis ER-dependent peroxisome organization protein localization establishment of protein localization cellular localization nitrogen compound transport organic substance transport protein transport cellular macromolecule localization macromolecule localization	membrane-bounded organelle intracellular organelle organelle envelope intracellular anatomical structure organelle nuclear envelope nucleus cellular anatomical entity intracellular membrane-bounded organelle endomembrane system protein-containing complex vesicle tethering complex Dsl1/NZR complex endoplasmic reticulum membrane-bounded organelle intracellular organelle organelle envelope intracellular anatomical structure organelle nuclear envelope nucleus cellular anatomical entity intracellular membrane-bounded organelle endomembrane system protein-containing complex vesicle tethering complex Dsl1/NZR complex endoplasmic reticulum cytoplasm endoplasmic reticulum protein-containing complex organelle subcompartment membrane endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network organelle membrane endoplasmic reticulum membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth C]	IPR021876	Retrograde transport protein Dsl1, C-terminal domain	Domain
A [auth C]	IPR021875	Retrograde transport protein Dsl1 N-terminal domain	Domain
A [auth C]	IPR038442	Dsl1, N-terminal domain superfamily	Homologous Superfamily
A [auth C]	IPR046362	Zw10/DSL1, C-terminal	Homologous Superfamily
B [auth D]	IPR013244	Sec39 domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.