3JAU
The cryoEM map of EV71 mature viron in complex with the Fab fragment of antibody D5
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth H] | PF07686 | e3jauH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
C [auth L] | PF07686 | e3jauL1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
B [auth H] | D5 FV | VH | Mus musculus (house mouse) | IGHV14-3*02, IGHJ2*01 | V-DOMAIN VH | IG | FV-HEAVY_KAPPA | IMGT (202419-0) |
C [auth L] | D5 FV | V-KAPPA | Mus musculus (house mouse) | IGKV1-117*01, IGKJ2*01 | V-DOMAIN V-KAPPA | IG | FV-HEAVY_KAPPA | IMGT (202419-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
B [auth H] | Heavy Chain | IGHV14 | - | capsid protein vp1 | SAbDab (2024-05-17) |
C [auth L] | Light Chain | IGKV1 | Kappa | capsid protein vp1 | SAbDab (2024-05-17) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00073 | picornavirus capsid protein (Rhv) | picornavirus capsid protein | CAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornavi ... | Domain | |