3J1C

Cryo-EM structure of 9-fold symmetric rATcpn-alpha in apo state


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00118e3j1cA1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: PF00118ECOD (1.6)
APF00118e3j1cA3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: PF00118ECOD (1.6)
AF_UNCLASSIFIEDe3j1cA2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: F_UNCLASSIFIEDECOD (1.6)
BPF00118e3j1cB1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: PF00118ECOD (1.6)
BPF00118e3j1cB3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: PF00118ECOD (1.6)
BF_UNCLASSIFIEDe3j1cB2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: F_UNCLASSIFIEDECOD (1.6)
CPF00118e3j1cC1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: PF00118ECOD (1.6)
CPF00118e3j1cC3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: PF00118ECOD (1.6)
CF_UNCLASSIFIEDe3j1cC2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: F_UNCLASSIFIEDECOD (1.6)
DPF00118e3j1cD1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: PF00118ECOD (1.6)
DPF00118e3j1cD3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: PF00118ECOD (1.6)
DF_UNCLASSIFIEDe3j1cD2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: F_UNCLASSIFIEDECOD (1.6)
EPF00118e3j1cE1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: PF00118ECOD (1.6)
EPF00118e3j1cE3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: PF00118ECOD (1.6)
EF_UNCLASSIFIEDe3j1cE2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: F_UNCLASSIFIEDECOD (1.6)
FPF00118e3j1cF1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: PF00118ECOD (1.6)
FPF00118e3j1cF3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: PF00118ECOD (1.6)
FF_UNCLASSIFIEDe3j1cF2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: F_UNCLASSIFIEDECOD (1.6)
GPF00118e3j1cG1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: PF00118ECOD (1.6)
GPF00118e3j1cG3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: PF00118ECOD (1.6)
GF_UNCLASSIFIEDe3j1cG2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: F_UNCLASSIFIEDECOD (1.6)
HPF00118e3j1cH1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: PF00118ECOD (1.6)
HPF00118e3j1cH3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: PF00118ECOD (1.6)
HF_UNCLASSIFIEDe3j1cH2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: F_UNCLASSIFIEDECOD (1.6)
IPF00118e3j1cI1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: PF00118ECOD (1.6)
IPF00118e3j1cI3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: PF00118ECOD (1.6)
IF_UNCLASSIFIEDe3j1cI2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: F_UNCLASSIFIEDECOD (1.6)
JPF00118e3j1cJ1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: PF00118ECOD (1.6)
JPF00118e3j1cJ3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: PF00118ECOD (1.6)
JF_UNCLASSIFIEDe3j1cJ2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: F_UNCLASSIFIEDECOD (1.6)
KPF00118e3j1cK1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: PF00118ECOD (1.6)
KPF00118e3j1cK3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: PF00118ECOD (1.6)
KF_UNCLASSIFIEDe3j1cK2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: F_UNCLASSIFIEDECOD (1.6)
LPF00118e3j1cL1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: PF00118ECOD (1.6)
LPF00118e3j1cL3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: PF00118ECOD (1.6)
LF_UNCLASSIFIEDe3j1cL2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: F_UNCLASSIFIEDECOD (1.6)
MPF00118e3j1cM1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: PF00118ECOD (1.6)
MPF00118e3j1cM3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: PF00118ECOD (1.6)
MF_UNCLASSIFIEDe3j1cM2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: F_UNCLASSIFIEDECOD (1.6)
NPF00118e3j1cN1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: PF00118ECOD (1.6)
NPF00118e3j1cN3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: PF00118ECOD (1.6)
NF_UNCLASSIFIEDe3j1cN2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: F_UNCLASSIFIEDECOD (1.6)
OPF00118e3j1cO1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: PF00118ECOD (1.6)
OPF00118e3j1cO3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: PF00118ECOD (1.6)
OF_UNCLASSIFIEDe3j1cO2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: F_UNCLASSIFIEDECOD (1.6)
PPF00118e3j1cP1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: PF00118ECOD (1.6)
PPF00118e3j1cP3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: PF00118ECOD (1.6)
PF_UNCLASSIFIEDe3j1cP2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: F_UNCLASSIFIEDECOD (1.6)
QPF00118e3j1cQ1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: PF00118ECOD (1.6)
QPF00118e3j1cQ3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: PF00118ECOD (1.6)
QF_UNCLASSIFIEDe3j1cQ2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: F_UNCLASSIFIEDECOD (1.6)
RPF00118e3j1cR1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: PF00118ECOD (1.6)
RPF00118e3j1cR3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: PF00118ECOD (1.6)
RF_UNCLASSIFIEDe3j1cR2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: F_UNCLASSIFIEDECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00118TCP-1/cpn60 chaperonin family (Cpn60_TCP1)TCP-1/cpn60 chaperonin family- Family

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR027413GroEL-like equatorial domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR017998Chaperone tailless complex polypeptide 1 (TCP-1)Family
A, B, C, D, E
IPR027410TCP-1-like chaperonin intermediate domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR002194Chaperonin TCP-1, conserved siteConserved Site
A, B, C, D, E
IPR027409GroEL-like apical domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR012714Thermosome, archaealFamily
A, B, C, D, E
IPR002423Chaperonin Cpn60/GroEL/TCP-1 familyFamily