3IXV

Scorpion Hemocyanin resting state pseudo atomic model built based on cryo-EM density map

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C [auth D]	PF03723	e3ixvD1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF03723	ECOD (1.6)
C [auth D]	PF00372	e3ixvD2	A: alpha arrays	X: Di-copper centre-containing domain (From Topology)	H: Di-copper centre-containing domain (From Topology)	T: Di-copper centre-containing domain	F: PF00372	ECOD (1.6)
C [auth D]	PF03722	e3ixvD3	A: alpha bundles	X: Hemocyanin-N (From Topology)	H: Hemocyanin-N (From Topology)	T: Hemocyanin-N	F: PF03722	ECOD (1.6)
I [auth J]	PF03723	e3ixvJ1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF03723	ECOD (1.6)
I [auth J]	PF00372	e3ixvJ2	A: alpha arrays	X: Di-copper centre-containing domain (From Topology)	H: Di-copper centre-containing domain (From Topology)	T: Di-copper centre-containing domain	F: PF00372	ECOD (1.6)
I [auth J]	PF03722	e3ixvJ3	A: alpha bundles	X: Hemocyanin-N (From Topology)	H: Hemocyanin-N (From Topology)	T: Hemocyanin-N	F: PF03722	ECOD (1.6)
A	PF03723	e3ixvA2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF03723	ECOD (1.6)
A	PF00372	e3ixvA1	A: alpha arrays	X: Di-copper centre-containing domain (From Topology)	H: Di-copper centre-containing domain (From Topology)	T: Di-copper centre-containing domain	F: PF00372	ECOD (1.6)
A	PF03722	e3ixvA3	A: alpha bundles	X: Hemocyanin-N (From Topology)	H: Hemocyanin-N (From Topology)	T: Hemocyanin-N	F: PF03722	ECOD (1.6)
B [auth C]	PF03723	e3ixvC1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF03723	ECOD (1.6)
B [auth C]	PF00372	e3ixvC2	A: alpha arrays	X: Di-copper centre-containing domain (From Topology)	H: Di-copper centre-containing domain (From Topology)	T: Di-copper centre-containing domain	F: PF00372	ECOD (1.6)
B [auth C]	PF03722	e3ixvC3	A: alpha bundles	X: Hemocyanin-N (From Topology)	H: Hemocyanin-N (From Topology)	T: Hemocyanin-N	F: PF03722	ECOD (1.6)
D [auth E]	PF03723	e3ixvE1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF03723	ECOD (1.6)
D [auth E]	PF00372	e3ixvE2	A: alpha arrays	X: Di-copper centre-containing domain (From Topology)	H: Di-copper centre-containing domain (From Topology)	T: Di-copper centre-containing domain	F: PF00372	ECOD (1.6)
D [auth E]	PF03722	e3ixvE3	A: alpha bundles	X: Hemocyanin-N (From Topology)	H: Hemocyanin-N (From Topology)	T: Hemocyanin-N	F: PF03722	ECOD (1.6)
E [auth F]	PF03723	e3ixvF1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF03723	ECOD (1.6)
E [auth F]	PF00372	e3ixvF2	A: alpha arrays	X: Di-copper centre-containing domain (From Topology)	H: Di-copper centre-containing domain (From Topology)	T: Di-copper centre-containing domain	F: PF00372	ECOD (1.6)
E [auth F]	PF03722	e3ixvF3	A: alpha bundles	X: Hemocyanin-N (From Topology)	H: Hemocyanin-N (From Topology)	T: Hemocyanin-N	F: PF03722	ECOD (1.6)
F [auth G]	PF03723	e3ixvG1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF03723	ECOD (1.6)
F [auth G]	PF00372	e3ixvG2	A: alpha arrays	X: Di-copper centre-containing domain (From Topology)	H: Di-copper centre-containing domain (From Topology)	T: Di-copper centre-containing domain	F: PF00372	ECOD (1.6)
F [auth G]	PF03722	e3ixvG3	A: alpha bundles	X: Hemocyanin-N (From Topology)	H: Hemocyanin-N (From Topology)	T: Hemocyanin-N	F: PF03722	ECOD (1.6)
G [auth H]	PF03723	e3ixvH1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF03723	ECOD (1.6)
G [auth H]	PF00372	e3ixvH2	A: alpha arrays	X: Di-copper centre-containing domain (From Topology)	H: Di-copper centre-containing domain (From Topology)	T: Di-copper centre-containing domain	F: PF00372	ECOD (1.6)
G [auth H]	PF03722	e3ixvH3	A: alpha bundles	X: Hemocyanin-N (From Topology)	H: Hemocyanin-N (From Topology)	T: Hemocyanin-N	F: PF03722	ECOD (1.6)
H [auth I]	PF03723	e3ixvI1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF03723	ECOD (1.6)
H [auth I]	PF00372	e3ixvI2	A: alpha arrays	X: Di-copper centre-containing domain (From Topology)	H: Di-copper centre-containing domain (From Topology)	T: Di-copper centre-containing domain	F: PF00372	ECOD (1.6)
H [auth I]	PF03722	e3ixvI3	A: alpha bundles	X: Hemocyanin-N (From Topology)	H: Hemocyanin-N (From Topology)	T: Hemocyanin-N	F: PF03722	ECOD (1.6)
J [auth K]	PF03723	e3ixvK1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF03723	ECOD (1.6)
J [auth K]	PF00372	e3ixvK2	A: alpha arrays	X: Di-copper centre-containing domain (From Topology)	H: Di-copper centre-containing domain (From Topology)	T: Di-copper centre-containing domain	F: PF00372	ECOD (1.6)
J [auth K]	PF03722	e3ixvK3	A: alpha bundles	X: Hemocyanin-N (From Topology)	H: Hemocyanin-N (From Topology)	T: Hemocyanin-N	F: PF03722	ECOD (1.6)
K [auth L]	PF03723	e3ixvL1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF03723	ECOD (1.6)
K [auth L]	PF00372	e3ixvL2	A: alpha arrays	X: Di-copper centre-containing domain (From Topology)	H: Di-copper centre-containing domain (From Topology)	T: Di-copper centre-containing domain	F: PF00372	ECOD (1.6)
K [auth L]	PF03722	e3ixvL3	A: alpha bundles	X: Hemocyanin-N (From Topology)	H: Hemocyanin-N (From Topology)	T: Hemocyanin-N	F: PF03722	ECOD (1.6)
L [auth M]	PF03723	e3ixvM1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF03723	ECOD (1.6)
L [auth M]	PF00372	e3ixvM2	A: alpha arrays	X: Di-copper centre-containing domain (From Topology)	H: Di-copper centre-containing domain (From Topology)	T: Di-copper centre-containing domain	F: PF00372	ECOD (1.6)
L [auth M]	PF03722	e3ixvM3	A: alpha bundles	X: Hemocyanin-N (From Topology)	H: Hemocyanin-N (From Topology)	T: Hemocyanin-N	F: PF03722	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B [auth C], C [auth D], D [auth E], E [auth F], A, B [auth C], C [auth D], D [auth E], E [auth F], F [auth G], G [auth H], H [auth I], I [auth J], J [auth K], K [auth L], L [auth M]	PF00372	Hemocyanin, copper containing domain (Hemocyanin_M)	Hemocyanin, copper containing domain	This family includes arthropod hemocyanins and insect larval storage proteins.	Domain
A, B [auth C], C [auth D], D [auth E], E [auth F], A, B [auth C], C [auth D], D [auth E], E [auth F], F [auth G], G [auth H], H [auth I], I [auth J], J [auth K], K [auth L], L [auth M]	PF03722	Hemocyanin, all-alpha domain (Hemocyanin_N)	Hemocyanin, all-alpha domain	This family includes arthropod hemocyanins and insect larval storage proteins.	Domain
A, B [auth C], C [auth D], D [auth E], E [auth F], A, B [auth C], C [auth D], D [auth E], E [auth F], F [auth G], G [auth H], H [auth I], I [auth J], J [auth K], K [auth L], L [auth M]	PF03723	Hemocyanin, ig-like domain (Hemocyanin_C)	Hemocyanin, ig-like domain	This family includes arthropod hemocyanins and insect larval storage proteins.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B [auth C], C [auth D], D [auth E], E [auth F], A, B [auth C], C [auth D], D [auth E], E [auth F], F [auth G], G [auth H], H [auth I], I [auth J], J [auth K], K [auth L], L [auth M]	Hemocyanin AA6 chain	oxidoreductase activity catalytic activity oxygen carrier activity molecular carrier activity cation binding transition metal ion binding copper ion binding ion binding binding metal ion binding small molecule binding anion binding chloride ion binding	-	extracellular region cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B [auth C], C [auth D], D [auth E], E [auth F], A, B [auth C], C [auth D], D [auth E], E [auth F], F [auth G], G [auth H], H [auth I], I [auth J], J [auth K], K [auth L], L [auth M]	IPR005204	Hemocyanin, N-terminal	Domain
A, B [auth C], C [auth D], D [auth E], E [auth F], A, B [auth C], C [auth D], D [auth E], E [auth F], F [auth G], G [auth H], H [auth I], I [auth J], J [auth K], K [auth L], L [auth M]	IPR036697	Hemocyanin, N-terminal domain superfamily	Homologous Superfamily
A, B [auth C], C [auth D], D [auth E], E [auth F], A, B [auth C], C [auth D], D [auth E], E [auth F], F [auth G], G [auth H], H [auth I], I [auth J], J [auth K], K [auth L], L [auth M]	IPR002227	Tyrosinase copper-binding domain	Domain
A, B [auth C], C [auth D], D [auth E], E [auth F], A, B [auth C], C [auth D], D [auth E], E [auth F], F [auth G], G [auth H], H [auth I], I [auth J], J [auth K], K [auth L], L [auth M]	IPR014756	Immunoglobulin E-set	Homologous Superfamily
A, B [auth C], C [auth D], D [auth E], E [auth F], A, B [auth C], C [auth D], D [auth E], E [auth F], F [auth G], G [auth H], H [auth I], I [auth J], J [auth K], K [auth L], L [auth M]	IPR008922	Di-copper centre-containing domain superfamily	Homologous Superfamily
A, B [auth C], C [auth D], D [auth E], E [auth F], A, B [auth C], C [auth D], D [auth E], E [auth F], F [auth G], G [auth H], H [auth I], I [auth J], J [auth K], K [auth L], L [auth M]	IPR037020	Hemocyanin, C-terminal domain superfamily	Homologous Superfamily
A, B [auth C], C [auth D], D [auth E], E [auth F], A, B [auth C], C [auth D], D [auth E], E [auth F], F [auth G], G [auth H], H [auth I], I [auth J], J [auth K], K [auth L], L [auth M]	IPR000896	Hemocyanin/hexamerin middle domain	Domain
A, B [auth C], C [auth D], D [auth E], E [auth F], A, B [auth C], C [auth D], D [auth E], E [auth F], F [auth G], G [auth H], H [auth I], I [auth J], J [auth K], K [auth L], L [auth M]	IPR013788	Hemocyanin/hexamerin	Family
A, B [auth C], C [auth D], D [auth E], E [auth F], A, B [auth C], C [auth D], D [auth E], E [auth F], F [auth G], G [auth H], H [auth I], I [auth J], J [auth K], K [auth L], L [auth M]	IPR005203	Hemocyanin, C-terminal	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.

Prepare Data

Validate Data

Deposit Data

Help and Resources

3IXV

Scorpion Hemocyanin resting state pseudo atomic model built based on cryo-EM density map

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage