3FEM
Structure of the synthase subunit Pdx1.1 (Snz1) of PLP synthase from Saccharomyces cerevisiae
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8085970 | 3000216 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8085970 | 3000216 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8085970 | 3000216 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8085970 | 3000216 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8085970 | 3000216 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8085970 | 3000216 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01680 | e3femA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01680 | ECOD (1.6) |
B | PF01680 | e3femB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01680 | ECOD (1.6) |
C | PF01680 | e3femC1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01680 | ECOD (1.6) |
D | PF01680 | e3femD1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01680 | ECOD (1.6) |
E | PF01680 | e3femE1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01680 | ECOD (1.6) |
F | PF01680 | e3femF1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01680 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
B | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
C | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
D | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
E | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
F | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011060 | Ribulose-phosphate binding barrel | Homologous Superfamily | |
IPR001852 | Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ | Family | |
IPR013785 | Aldolase-type TIM barrel | Homologous Superfamily | |
IPR033755 | PdxS/SNZ N-terminal domain | Domain |