3BH3

Crystal structure of acetoacetate decarboxylase from Chromobacterium violaceum in complex with acetyl acetone Schiff base intermediate

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d3bh3a_	Alpha and beta proteins (a+b)	Acetoacetate decarboxylase-like	Acetoacetate decarboxylase-like	automated matches	automated matches	(Chromobacterium violaceum ATCC 12472 ) [TaxId: 243365 ],	SCOPe (2.08)
B	d3bh3b_	Alpha and beta proteins (a+b)	Acetoacetate decarboxylase-like	Acetoacetate decarboxylase-like	automated matches	automated matches	(Chromobacterium violaceum ATCC 12472 ) [TaxId: 243365 ],	SCOPe (2.08)
C	d3bh3c_	Alpha and beta proteins (a+b)	Acetoacetate decarboxylase-like	Acetoacetate decarboxylase-like	automated matches	automated matches	(Chromobacterium violaceum ATCC 12472 ) [TaxId: 243365 ],	SCOPe (2.08)
D	d3bh3d_	Alpha and beta proteins (a+b)	Acetoacetate decarboxylase-like	Acetoacetate decarboxylase-like	automated matches	automated matches	(Chromobacterium violaceum ATCC 12472 ) [TaxId: 243365 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Acetoacetate decarboxylase-like	8086271	3000322	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Acetoacetate decarboxylase-like	8086271	3000322	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Acetoacetate decarboxylase-like	8086271	3000322	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Acetoacetate decarboxylase-like	8086271	3000322	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF06314	e3bh3A1	A: beta barrels	X: Acetoacetate decarboxylase-like (From Topology)	H: Acetoacetate decarboxylase-like (From Topology)	T: Acetoacetate decarboxylase-like	F: PF06314	ECOD (1.6)
B	PF06314	e3bh3B1	A: beta barrels	X: Acetoacetate decarboxylase-like (From Topology)	H: Acetoacetate decarboxylase-like (From Topology)	T: Acetoacetate decarboxylase-like	F: PF06314	ECOD (1.6)
C	PF06314	e3bh3C1	A: beta barrels	X: Acetoacetate decarboxylase-like (From Topology)	H: Acetoacetate decarboxylase-like (From Topology)	T: Acetoacetate decarboxylase-like	F: PF06314	ECOD (1.6)
D	PF06314	e3bh3D1	A: beta barrels	X: Acetoacetate decarboxylase-like (From Topology)	H: Acetoacetate decarboxylase-like (From Topology)	T: Acetoacetate decarboxylase-like	F: PF06314	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.40.400.10	Mainly Beta	Beta Barrel	Acetoacetate decarboxylase-like	Acetoacetate decarboxylase-like	CATH (4.3.0)
B	2.40.400.10	Mainly Beta	Beta Barrel	Acetoacetate decarboxylase-like	Acetoacetate decarboxylase-like	CATH (4.3.0)
C	2.40.400.10	Mainly Beta	Beta Barrel	Acetoacetate decarboxylase-like	Acetoacetate decarboxylase-like	CATH (4.3.0)
D	2.40.400.10	Mainly Beta	Beta Barrel	Acetoacetate decarboxylase-like	Acetoacetate decarboxylase-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF06314	Acetoacetate decarboxylase (ADC) (ADC)	Acetoacetate decarboxylase (ADC)	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Acetoacetate decarboxylase	acetoacetate decarboxylase activity carboxy-lyase activity lyase activity catalytic activity carbon-carbon lyase activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR023653	Acetoacetate decarboxylase, bacterial	Family
A, B, C, D	IPR010451	Acetoacetate decarboxylase	Family
A, B, C, D	IPR023375	Acetoacetate decarboxylase domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.